Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNTNAP3Q9BZ76 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 AC004408.2-201ENST00000623613 2777 ntBASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 AC125437.2-201ENST00000625180 2167 ntBASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 AL158211.5-201ENST00000623583 2518 ntBASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 SDHAP1-207ENST00000440850 2000 ntBASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CNTNAP3Q9BZ76 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 AC125807.1-201ENST00000483097 614 ntBASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 ZNF815P-204ENST00000434898 1737 ntBASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CNTNAP3Q9BZ76 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CNTNAP3Q9BZ76 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms