Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 AC122714.2-201ENST00000502787 707 ntBASIC18.25■□□□□ 0.51
RPRD1AQ96P16 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPRD1AQ96P16 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 AC004870.1-201ENST00000315132 882 ntBASIC18.24■□□□□ 0.51
RPRD1AQ96P16 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 TPM4P1-201ENST00000436100 807 ntBASIC18.24■□□□□ 0.51
RPRD1AQ96P16 EMBP1-201ENST00000458200 901 ntBASIC18.24■□□□□ 0.51
RPRD1AQ96P16 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 AC012317.2-201ENST00000623305 2251 ntBASIC18.24■□□□□ 0.51
RPRD1AQ96P16 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.24■□□□□ 0.51
RPRD1AQ96P16 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 SIRPAP1-201ENST00000448467 1770 ntBASIC18.23■□□□□ 0.51
RPRD1AQ96P16 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 SLC25A6P5-201ENST00000435663 894 ntBASIC18.23■□□□□ 0.51
RPRD1AQ96P16 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 AL121894.2-201ENST00000602977 491 ntBASIC18.23■□□□□ 0.51
RPRD1AQ96P16 REXO1L6P-202ENST00000619970 1078 ntBASIC18.23■□□□□ 0.51
RPRD1AQ96P16 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RPRD1AQ96P16 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RPRD1AQ96P16 AKR1C7P-201ENST00000305623 895 ntBASIC18.22■□□□□ 0.51
RPRD1AQ96P16 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms