Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AC012313.10-201ENST00000623509 926 ntBASIC15.91■□□□□ 0.14
CPNE4Q96A23 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE4Q96A23 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE4Q96A23 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE4Q96A23 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE4Q96A23 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE4Q96A23 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE4Q96A23 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE4Q96A23 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE4Q96A23 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.91■□□□□ 0.14
CPNE4Q96A23 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE4Q96A23 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CPNE4Q96A23 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 BX276092.7-203ENST00000637198 1536 ntBASIC15.9■□□□□ 0.14
CPNE4Q96A23 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 AL450487.1-201ENST00000426799 995 ntBASIC15.9■□□□□ 0.14
CPNE4Q96A23 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 KRT126P-201ENST00000549467 1181 ntBASIC15.9■□□□□ 0.14
CPNE4Q96A23 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 AC111152.3-201ENST00000569699 673 ntBASIC15.9■□□□□ 0.14
CPNE4Q96A23 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 AL691432.3-201ENST00000621860 400 ntBASIC15.9■□□□□ 0.14
CPNE4Q96A23 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CPNE4Q96A23 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CPNE4Q96A23 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.14
CPNE4Q96A23 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
CPNE4Q96A23 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE4Q96A23 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE4Q96A23 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE4Q96A23 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CPNE4Q96A23 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.89■□□□□ 0.13
CPNE4Q96A23 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE4Q96A23 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE4Q96A23 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.89■□□□□ 0.13
CPNE4Q96A23 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CPNE4Q96A23 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE4Q96A23 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.89■□□□□ 0.13
CPNE4Q96A23 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE4Q96A23 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE4Q96A23 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE4Q96A23 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.89■□□□□ 0.13
CPNE4Q96A23 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
CPNE4Q96A23 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE4Q96A23 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE4Q96A23 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.89■□□□□ 0.13
CPNE4Q96A23 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.89■□□□□ 0.13
CPNE4Q96A23 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.89■□□□□ 0.13
CPNE4Q96A23 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CPNE4Q96A23 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.89■□□□□ 0.13
CPNE4Q96A23 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.89■□□□□ 0.13
CPNE4Q96A23 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.89■□□□□ 0.13
CPNE4Q96A23 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE4Q96A23 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CPNE4Q96A23 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms