Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 GOLGA6D-201ENST00000434739 2123 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SVIPQ8NHG7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
SVIPQ8NHG7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC11□□□□□ -0.65
SVIPQ8NHG7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 AC117489.1-201ENST00000625169 3217 ntBASIC11□□□□□ -0.65
SVIPQ8NHG7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC11□□□□□ -0.65
SVIPQ8NHG7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
SVIPQ8NHG7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC11□□□□□ -0.65
SVIPQ8NHG7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC11□□□□□ -0.65
SVIPQ8NHG7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC11□□□□□ -0.65
SVIPQ8NHG7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC11□□□□□ -0.65
SVIPQ8NHG7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
SVIPQ8NHG7 C9orf64-201ENST00000314700 2067 ntTSL 2 BASIC11□□□□□ -0.65
SVIPQ8NHG7 NUTM2HP-201ENST00000442076 2498 ntBASIC11□□□□□ -0.65
SVIPQ8NHG7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SVIPQ8NHG7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 TBC1D3F-201ENST00000620210 2117 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
SVIPQ8NHG7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 CTSE-201ENST00000358184 2228 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
SVIPQ8NHG7 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC11□□□□□ -0.65
SVIPQ8NHG7 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
SVIPQ8NHG7 AC091178.1-201ENST00000583447 2305 ntTSL 2 BASIC11□□□□□ -0.65
SVIPQ8NHG7 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 FPR1-201ENST00000304748 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 LRSAM1-202ENST00000323301 3376 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 FAM107A-204ENST00000464064 2159 ntTSL 2 BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 PRDM2-204ENST00000376048 2688 ntTSL 2 BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 OACYLP-201ENST00000417918 2208 ntBASIC10.99□□□□□ -0.65
SVIPQ8NHG7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 RN7SL121P-201ENST00000584223 273 ntBASIC10.99□□□□□ -0.65
SVIPQ8NHG7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 C1S-201ENST00000328916 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 SERPINA10-204ENST00000554723 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 AC012313.8-201ENST00000595059 5402 ntBASIC10.99□□□□□ -0.65
SVIPQ8NHG7 PMS2-201ENST00000265849 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 KIRREL1-201ENST00000359209 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
SVIPQ8NHG7 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
SVIPQ8NHG7 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms