Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINC00346Q8IVM7 AC080080.1-201ENST00000625121 2420 ntBASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 REXO1L11P-201ENST00000620964 1927 ntBASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINC00346Q8IVM7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 AC020916.1-201ENST00000587762 1774 ntBASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 AL353692.3-201ENST00000407031 1396 ntBASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 MIR662-201ENST00000384847 95 ntBASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 AC104076.2-201ENST00000448912 469 ntBASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 AC112698.1-201ENST00000510299 916 ntBASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 HLA-J-201ENST00000462773 1622 ntBASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 AL023806.1-201ENST00000603994 1649 ntBASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 LINC01311-201ENST00000565162 1445 ntBASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.68■□□□□ 0.1
LINC00346Q8IVM7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 CROCCP2-202ENST00000412962 2773 ntBASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
LINC00346Q8IVM7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms