Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 AC011467.4-201ENST00000594891 528 ntBASIC18.76■□□□□ 0.59
RNF135Q8IUD6 MTDHP4-201ENST00000600287 670 ntBASIC18.76■□□□□ 0.59
RNF135Q8IUD6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 AL139288.1-201ENST00000623748 933 ntBASIC18.76■□□□□ 0.59
RNF135Q8IUD6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF135Q8IUD6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.75■□□□□ 0.59
RNF135Q8IUD6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 MCCD1P2-201ENST00000423228 335 ntBASIC18.75■□□□□ 0.59
RNF135Q8IUD6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 COX20P2-201ENST00000452636 358 ntBASIC18.75■□□□□ 0.59
RNF135Q8IUD6 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 YBX1P5-201ENST00000509441 847 ntBASIC18.75■□□□□ 0.59
RNF135Q8IUD6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 AL138831.2-201ENST00000606564 490 ntBASIC18.75■□□□□ 0.59
RNF135Q8IUD6 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RNF135Q8IUD6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 HLA-J-203ENST00000494367 1087 ntBASIC18.74■□□□□ 0.59
RNF135Q8IUD6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 MIR4469-201ENST00000583919 79 ntBASIC18.74■□□□□ 0.59
RNF135Q8IUD6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 AC064836.3-201ENST00000607928 673 ntBASIC18.74■□□□□ 0.59
RNF135Q8IUD6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF135Q8IUD6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 MYLKP1-201ENST00000509077 1580 ntBASIC18.73■□□□□ 0.59
RNF135Q8IUD6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF135Q8IUD6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms