Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 AC019129.2-201ENST00000609837 1235 ntBASIC19.7■□□□□ 0.74
TRIM50Q86XT4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TRIM50Q86XT4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 SIGLEC16-201ENST00000599858 1437 ntBASIC19.69■□□□□ 0.74
TRIM50Q86XT4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 AL353593.2-201ENST00000602529 1483 ntBASIC19.69■□□□□ 0.74
TRIM50Q86XT4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 AC103564.2-201ENST00000432853 1299 ntBASIC19.69■□□□□ 0.74
TRIM50Q86XT4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 Z83851.2-201ENST00000609564 659 ntBASIC19.69■□□□□ 0.74
TRIM50Q86XT4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRIM50Q86XT4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 KRT18P13-201ENST00000400056 1290 ntBASIC19.68■□□□□ 0.74
TRIM50Q86XT4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 AC140113.2-201ENST00000604370 208 ntBASIC19.68■□□□□ 0.74
TRIM50Q86XT4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRIM50Q86XT4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 UNC93B6-202ENST00000528242 690 ntBASIC19.67■□□□□ 0.74
TRIM50Q86XT4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.67■□□□□ 0.74
TRIM50Q86XT4 PMS2P7-201ENST00000506558 1336 ntBASIC19.67■□□□□ 0.74
TRIM50Q86XT4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms