Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.4■□□□□ 0.86
OTOP1Q7RTM1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.4■□□□□ 0.86
OTOP1Q7RTM1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
OTOP1Q7RTM1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.4■□□□□ 0.86
OTOP1Q7RTM1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.4■□□□□ 0.86
OTOP1Q7RTM1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
OTOP1Q7RTM1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
OTOP1Q7RTM1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
OTOP1Q7RTM1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.39■□□□□ 0.86
OTOP1Q7RTM1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
OTOP1Q7RTM1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.39■□□□□ 0.86
OTOP1Q7RTM1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
OTOP1Q7RTM1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 KRT18P65-201ENST00000439811 1286 ntBASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.39■□□□□ 0.85
OTOP1Q7RTM1 AC132938.6-201ENST00000623828 1655 ntBASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 AC063926.2-201ENST00000623766 1308 ntBASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 AC112698.1-201ENST00000510299 916 ntBASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
OTOP1Q7RTM1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 ELK2BP-201ENST00000415014 1224 ntBASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 AC093010.1-201ENST00000473625 1624 ntBASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.37■□□□□ 0.85
OTOP1Q7RTM1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
OTOP1Q7RTM1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms