Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
LCA10Q71F78 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC9.59□□□□□ -0.87
LCA10Q71F78 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC9.59□□□□□ -0.87
LCA10Q71F78 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
LCA10Q71F78 SNX18-202ENST00000343017 3140 ntBASIC9.59□□□□□ -0.87
LCA10Q71F78 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
LCA10Q71F78 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC9.59□□□□□ -0.87
LCA10Q71F78 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
LCA10Q71F78 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
LCA10Q71F78 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
LCA10Q71F78 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC9.59□□□□□ -0.87
LCA10Q71F78 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
LCA10Q71F78 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC9.59□□□□□ -0.88
LCA10Q71F78 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC9.58□□□□□ -0.88
LCA10Q71F78 GOLGA8DP-202ENST00000341390 2184 ntBASIC9.58□□□□□ -0.88
LCA10Q71F78 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC9.58□□□□□ -0.88
LCA10Q71F78 CR383656.2-201ENST00000548656 2254 ntBASIC9.58□□□□□ -0.88
LCA10Q71F78 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
LCA10Q71F78 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC9.58□□□□□ -0.88
LCA10Q71F78 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC9.58□□□□□ -0.88
LCA10Q71F78 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC9.58□□□□□ -0.88
LCA10Q71F78 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC9.58□□□□□ -0.88
LCA10Q71F78 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
LCA10Q71F78 AL512353.2-201ENST00000448759 1962 ntBASIC9.58□□□□□ -0.88
LCA10Q71F78 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC9.58□□□□□ -0.88
LCA10Q71F78 SERP1-205ENST00000487153 657 ntTSL 4 BASIC9.58□□□□□ -0.88
LCA10Q71F78 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC9.58□□□□□ -0.88
LCA10Q71F78 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC9.58□□□□□ -0.88
LCA10Q71F78 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
LCA10Q71F78 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 LINC00602-201ENST00000629776 2065 ntBASIC9.58□□□□□ -0.88
LCA10Q71F78 ZNF815P-204ENST00000434898 1737 ntBASIC9.58□□□□□ -0.88
LCA10Q71F78 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
LCA10Q71F78 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
LCA10Q71F78 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
LCA10Q71F78 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC9.58□□□□□ -0.88
LCA10Q71F78 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
LCA10Q71F78 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
LCA10Q71F78 AL162741.1-201ENST00000565563 1558 ntBASIC9.58□□□□□ -0.88
LCA10Q71F78 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC9.58□□□□□ -0.88
LCA10Q71F78 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
LCA10Q71F78 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
LCA10Q71F78 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
LCA10Q71F78 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC9.58□□□□□ -0.88
LCA10Q71F78 AC138035.3-201ENST00000622706 2791 ntBASIC9.58□□□□□ -0.88
LCA10Q71F78 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
LCA10Q71F78 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LCA10Q71F78 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LCA10Q71F78 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
LCA10Q71F78 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC9.57□□□□□ -0.88
LCA10Q71F78 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC9.57□□□□□ -0.88
LCA10Q71F78 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
LCA10Q71F78 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
LCA10Q71F78 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
LCA10Q71F78 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
LCA10Q71F78 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
LCA10Q71F78 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
LCA10Q71F78 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC9.57□□□□□ -0.88
LCA10Q71F78 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
LCA10Q71F78 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
LCA10Q71F78 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
LCA10Q71F78 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
LCA10Q71F78 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms