Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CASC4Q6P4E1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CASC4Q6P4E1 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CASC4Q6P4E1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CASC4Q6P4E1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CASC4Q6P4E1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 AL441883.1-201ENST00000566170 1045 ntBASIC18.08■□□□□ 0.48
CASC4Q6P4E1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 AC079602.3-201ENST00000623931 403 ntBASIC18.08■□□□□ 0.48
CASC4Q6P4E1 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 AL023806.1-201ENST00000603994 1649 ntBASIC18.08■□□□□ 0.48
CASC4Q6P4E1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CASC4Q6P4E1 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 AL137013.1-201ENST00000432946 1228 ntBASIC18.07■□□□□ 0.48
CASC4Q6P4E1 KRT18P65-201ENST00000439811 1286 ntBASIC18.07■□□□□ 0.48
CASC4Q6P4E1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 AC005363.2-201ENST00000618631 242 ntBASIC18.07■□□□□ 0.48
CASC4Q6P4E1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CASC4Q6P4E1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 FAM8A6P-201ENST00000407496 1135 ntBASIC18.06■□□□□ 0.48
CASC4Q6P4E1 KRT18P48-201ENST00000434763 852 ntBASIC18.06■□□□□ 0.48
CASC4Q6P4E1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.06■□□□□ 0.48
CASC4Q6P4E1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 SIRPAP1-201ENST00000448467 1770 ntBASIC18.06■□□□□ 0.48
CASC4Q6P4E1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.06■□□□□ 0.48
CASC4Q6P4E1 KRT89P-201ENST00000620027 1478 ntBASIC18.06■□□□□ 0.48
CASC4Q6P4E1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CASC4Q6P4E1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CASC4Q6P4E1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms