Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.35■■□□□ 1.01
RFX7Q2KHR2 AL139288.1-201ENST00000623748 933 ntBASIC21.35■■□□□ 1.01
RFX7Q2KHR2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX7Q2KHR2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RFX7Q2KHR2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFX7Q2KHR2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RFX7Q2KHR2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
RFX7Q2KHR2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFX7Q2KHR2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFX7Q2KHR2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFX7Q2KHR2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.33■■□□□ 1
RFX7Q2KHR2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
RFX7Q2KHR2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.33■■□□□ 1
RFX7Q2KHR2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RFX7Q2KHR2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RFX7Q2KHR2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.33■■□□□ 1
RFX7Q2KHR2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC21.33■■□□□ 1
RFX7Q2KHR2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
RFX7Q2KHR2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.33■■□□□ 1
RFX7Q2KHR2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
RFX7Q2KHR2 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.33■■□□□ 1
RFX7Q2KHR2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC21.33■■□□□ 1
RFX7Q2KHR2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.33■■□□□ 1
RFX7Q2KHR2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RFX7Q2KHR2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.32■■□□□ 1
RFX7Q2KHR2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.32■■□□□ 1
RFX7Q2KHR2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFX7Q2KHR2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFX7Q2KHR2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.32■■□□□ 1
RFX7Q2KHR2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFX7Q2KHR2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RFX7Q2KHR2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RFX7Q2KHR2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21.32■■□□□ 1
RFX7Q2KHR2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.32■■□□□ 1
RFX7Q2KHR2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.32■■□□□ 1
RFX7Q2KHR2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.32■■□□□ 1
RFX7Q2KHR2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.32■■□□□ 1
RFX7Q2KHR2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
RFX7Q2KHR2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.32■■□□□ 1
RFX7Q2KHR2 IGHV3-22-201ENST00000520721 359 ntBASIC21.32■■□□□ 1
RFX7Q2KHR2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.32■■□□□ 1
RFX7Q2KHR2 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.32■■□□□ 1
RFX7Q2KHR2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.32■■□□□ 1
RFX7Q2KHR2 AC106730.1-201ENST00000566722 1090 ntBASIC21.32■■□□□ 1
RFX7Q2KHR2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.32■■□□□ 1
RFX7Q2KHR2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.32■■□□□ 1
RFX7Q2KHR2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC21.32■■□□□ 1
RFX7Q2KHR2 AP000867.4-201ENST00000641616 219 ntBASIC21.32■■□□□ 1
RFX7Q2KHR2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.32■■□□□ 1
RFX7Q2KHR2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
RFX7Q2KHR2 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.32■■□□□ 1
RFX7Q2KHR2 AC018470.1-201ENST00000624790 3129 ntBASIC21.32■■□□□ 1
RFX7Q2KHR2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
RFX7Q2KHR2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFX7Q2KHR2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFX7Q2KHR2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms