Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC20.7■□□□□ 0.9
GABPAQ06546 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
GABPAQ06546 AC140113.2-201ENST00000604370 208 ntBASIC20.7■□□□□ 0.9
GABPAQ06546 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
GABPAQ06546 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.7■□□□□ 0.9
GABPAQ06546 REXO1L11P-201ENST00000620964 1927 ntBASIC20.7■□□□□ 0.9
GABPAQ06546 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.7■□□□□ 0.9
GABPAQ06546 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
GABPAQ06546 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
GABPAQ06546 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GABPAQ06546 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GABPAQ06546 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.69■□□□□ 0.9
GABPAQ06546 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GABPAQ06546 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
GABPAQ06546 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GABPAQ06546 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GABPAQ06546 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GABPAQ06546 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
GABPAQ06546 ELK2BP-201ENST00000415014 1224 ntBASIC20.69■□□□□ 0.9
GABPAQ06546 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GABPAQ06546 AC136632.2-201ENST00000512891 861 ntBASIC20.69■□□□□ 0.9
GABPAQ06546 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.69■□□□□ 0.9
GABPAQ06546 AC027601.4-201ENST00000611259 610 ntBASIC20.69■□□□□ 0.9
GABPAQ06546 FAM197Y3-203ENST00000618346 717 ntBASIC20.69■□□□□ 0.9
GABPAQ06546 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GABPAQ06546 PMS2P7-201ENST00000506558 1336 ntBASIC20.69■□□□□ 0.9
GABPAQ06546 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.69■□□□□ 0.9
GABPAQ06546 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.69■□□□□ 0.9
GABPAQ06546 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
GABPAQ06546 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
GABPAQ06546 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.68■□□□□ 0.9
GABPAQ06546 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
GABPAQ06546 AC006504.4-201ENST00000592118 1568 ntBASIC20.68■□□□□ 0.9
GABPAQ06546 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
GABPAQ06546 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
GABPAQ06546 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.68■□□□□ 0.9
GABPAQ06546 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABPAQ06546 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABPAQ06546 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.68■□□□□ 0.9
GABPAQ06546 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.68■□□□□ 0.9
GABPAQ06546 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.68■□□□□ 0.9
GABPAQ06546 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GABPAQ06546 STK19B-204ENST00000512515 211 ntBASIC20.68■□□□□ 0.9
GABPAQ06546 IGHV3-52-201ENST00000519770 353 ntBASIC20.68■□□□□ 0.9
GABPAQ06546 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABPAQ06546 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.68■□□□□ 0.9
GABPAQ06546 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.68■□□□□ 0.9
GABPAQ06546 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.68■□□□□ 0.9
GABPAQ06546 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GABPAQ06546 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABPAQ06546 AL354751.1-201ENST00000412768 1863 ntBASIC20.68■□□□□ 0.9
GABPAQ06546 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.68■□□□□ 0.9
GABPAQ06546 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GABPAQ06546 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABPAQ06546 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
GABPAQ06546 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GABPAQ06546 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
GABPAQ06546 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.67■□□□□ 0.9
GABPAQ06546 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
GABPAQ06546 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.67■□□□□ 0.9
GABPAQ06546 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
GABPAQ06546 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GABPAQ06546 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GABPAQ06546 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GABPAQ06546 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GABPAQ06546 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GABPAQ06546 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GABPAQ06546 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.67■□□□□ 0.9
GABPAQ06546 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GABPAQ06546 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GABPAQ06546 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.67■□□□□ 0.9
GABPAQ06546 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
GABPAQ06546 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.67■□□□□ 0.9
GABPAQ06546 TERC-201ENST00000602385 541 ntBASIC20.67■□□□□ 0.9
GABPAQ06546 PGM5P2-202ENST00000637225 1043 ntBASIC20.67■□□□□ 0.9
GABPAQ06546 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GABPAQ06546 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GABPAQ06546 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.67■□□□□ 0.9
GABPAQ06546 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GABPAQ06546 NCF1C-201ENST00000438382 1427 ntBASIC20.67■□□□□ 0.9
GABPAQ06546 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GABPAQ06546 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GABPAQ06546 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GABPAQ06546 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.67■□□□□ 0.9
GABPAQ06546 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GABPAQ06546 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
GABPAQ06546 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
GABPAQ06546 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GABPAQ06546 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
GABPAQ06546 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.66■□□□□ 0.9
GABPAQ06546 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.66■□□□□ 0.9
GABPAQ06546 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.66■□□□□ 0.9
GABPAQ06546 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.66■□□□□ 0.9
GABPAQ06546 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.66■□□□□ 0.9
GABPAQ06546 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GABPAQ06546 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GABPAQ06546 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.66■□□□□ 0.9
GABPAQ06546 AL139424.1-201ENST00000607572 797 ntBASIC20.66■□□□□ 0.9
GABPAQ06546 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GABPAQ06546 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms