Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCNKAP51800 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCNKAP51800 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CLCNKAP51800 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.37■□□□□ 0.37
CLCNKAP51800 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCNKAP51800 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCNKAP51800 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCNKAP51800 AP005117.1-201ENST00000584346 1413 ntBASIC17.37■□□□□ 0.37
CLCNKAP51800 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CLCNKAP51800 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCNKAP51800 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCNKAP51800 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCNKAP51800 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCNKAP51800 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCNKAP51800 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCNKAP51800 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CLCNKAP51800 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCNKAP51800 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCNKAP51800 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCNKAP51800 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.36■□□□□ 0.37
CLCNKAP51800 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.36■□□□□ 0.37
CLCNKAP51800 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.36■□□□□ 0.37
CLCNKAP51800 AP002469.2-201ENST00000531724 424 ntBASIC17.36■□□□□ 0.37
CLCNKAP51800 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.36■□□□□ 0.37
CLCNKAP51800 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCNKAP51800 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.36■□□□□ 0.37
CLCNKAP51800 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CLCNKAP51800 AP001269.4-201ENST00000609611 512 ntBASIC17.36■□□□□ 0.37
CLCNKAP51800 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCNKAP51800 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.36■□□□□ 0.37
CLCNKAP51800 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCNKAP51800 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCNKAP51800 KRT8P10-201ENST00000450021 1447 ntBASIC17.36■□□□□ 0.37
CLCNKAP51800 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCNKAP51800 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCNKAP51800 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCNKAP51800 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLCNKAP51800 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCNKAP51800 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCNKAP51800 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CLCNKAP51800 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.35■□□□□ 0.37
CLCNKAP51800 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.35■□□□□ 0.37
CLCNKAP51800 AC008608.2-201ENST00000606089 416 ntBASIC17.35■□□□□ 0.37
CLCNKAP51800 AP000867.4-201ENST00000641616 219 ntBASIC17.35■□□□□ 0.37
CLCNKAP51800 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CLCNKAP51800 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.35■□□□□ 0.37
CLCNKAP51800 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CLCNKAP51800 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLCNKAP51800 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CLCNKAP51800 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.35■□□□□ 0.37
CLCNKAP51800 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.35■□□□□ 0.37
CLCNKAP51800 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLCNKAP51800 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.35■□□□□ 0.37
CLCNKAP51800 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLCNKAP51800 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCNKAP51800 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
CLCNKAP51800 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLCNKAP51800 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCNKAP51800 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCNKAP51800 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCNKAP51800 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.34■□□□□ 0.37
CLCNKAP51800 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCNKAP51800 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCNKAP51800 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLCNKAP51800 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCNKAP51800 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCNKAP51800 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLCNKAP51800 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCNKAP51800 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.34■□□□□ 0.37
CLCNKAP51800 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLCNKAP51800 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CLCNKAP51800 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.34■□□□□ 0.37
CLCNKAP51800 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLCNKAP51800 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.34■□□□□ 0.37
CLCNKAP51800 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms