Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HOXC8P31273 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.18■□□□□ 0.66
HOXC8P31273 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXC8P31273 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXC8P31273 AL078644.1-201ENST00000609881 752 ntBASIC19.18■□□□□ 0.66
HOXC8P31273 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.18■□□□□ 0.66
HOXC8P31273 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC8P31273 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC8P31273 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC8P31273 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXC8P31273 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
HOXC8P31273 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
HOXC8P31273 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXC8P31273 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HOXC8P31273 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.18■□□□□ 0.66
HOXC8P31273 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.17■□□□□ 0.66
HOXC8P31273 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC8P31273 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXC8P31273 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC8P31273 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXC8P31273 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC8P31273 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HOXC8P31273 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC8P31273 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXC8P31273 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
HOXC8P31273 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC8P31273 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC8P31273 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.17■□□□□ 0.66
HOXC8P31273 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC8P31273 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC8P31273 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXC8P31273 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.17■□□□□ 0.66
HOXC8P31273 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXC8P31273 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.17■□□□□ 0.66
HOXC8P31273 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.17■□□□□ 0.66
HOXC8P31273 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXC8P31273 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC8P31273 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC8P31273 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXC8P31273 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC8P31273 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC8P31273 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC8P31273 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXC8P31273 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.16■□□□□ 0.66
HOXC8P31273 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC8P31273 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.16■□□□□ 0.66
HOXC8P31273 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC8P31273 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HOXC8P31273 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC8P31273 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.16■□□□□ 0.66
HOXC8P31273 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.16■□□□□ 0.66
HOXC8P31273 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.16■□□□□ 0.66
HOXC8P31273 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.16■□□□□ 0.66
HOXC8P31273 PAWRP1-201ENST00000451083 565 ntBASIC19.16■□□□□ 0.66
HOXC8P31273 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
HOXC8P31273 AL031432.2-201ENST00000566714 459 ntBASIC19.16■□□□□ 0.66
HOXC8P31273 AL928711.1-201ENST00000570165 459 ntBASIC19.16■□□□□ 0.66
HOXC8P31273 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC8P31273 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
HOXC8P31273 AL596442.2-201ENST00000610240 980 ntBASIC19.16■□□□□ 0.66
HOXC8P31273 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.16■□□□□ 0.66
HOXC8P31273 KRT18P28-201ENST00000453838 1332 ntBASIC19.16■□□□□ 0.66
HOXC8P31273 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXC8P31273 BCAR1-209ENST00000546196 1340 ntBASIC19.16■□□□□ 0.66
HOXC8P31273 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC8P31273 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.16■□□□□ 0.66
HOXC8P31273 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXC8P31273 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC8P31273 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXC8P31273 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXC8P31273 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HOXC8P31273 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HOXC8P31273 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXC8P31273 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXC8P31273 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC8P31273 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC8P31273 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC8P31273 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.15■□□□□ 0.66
HOXC8P31273 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC8P31273 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HOXC8P31273 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC8P31273 AL135999.2-201ENST00000622438 1686 ntBASIC19.15■□□□□ 0.66
HOXC8P31273 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC8P31273 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC8P31273 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC8P31273 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC8P31273 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC8P31273 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HOXC8P31273 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.15■□□□□ 0.66
HOXC8P31273 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.15■□□□□ 0.66
HOXC8P31273 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
HOXC8P31273 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.15■□□□□ 0.66
HOXC8P31273 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.15■□□□□ 0.66
HOXC8P31273 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.15■□□□□ 0.66
HOXC8P31273 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.15■□□□□ 0.66
HOXC8P31273 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.15■□□□□ 0.66
HOXC8P31273 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
HOXC8P31273 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.15■□□□□ 0.66
HOXC8P31273 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.15■□□□□ 0.66
HOXC8P31273 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms