Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA3P29320 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA3P29320 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.24■□□□□ 0.35
EPHA3P29320 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.24■□□□□ 0.35
EPHA3P29320 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
EPHA3P29320 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA3P29320 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
EPHA3P29320 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.24■□□□□ 0.35
EPHA3P29320 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA3P29320 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA3P29320 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
EPHA3P29320 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA3P29320 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.24■□□□□ 0.35
EPHA3P29320 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA3P29320 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.24■□□□□ 0.35
EPHA3P29320 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA3P29320 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA3P29320 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA3P29320 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA3P29320 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA3P29320 GCSHP5-201ENST00000443090 522 ntBASIC17.24■□□□□ 0.35
EPHA3P29320 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.24■□□□□ 0.35
EPHA3P29320 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.24■□□□□ 0.35
EPHA3P29320 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.24■□□□□ 0.35
EPHA3P29320 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.24■□□□□ 0.35
EPHA3P29320 FITM1-202ENST00000559294 800 ntBASIC17.24■□□□□ 0.35
EPHA3P29320 Z99916.2-201ENST00000604037 246 ntBASIC17.24■□□□□ 0.35
EPHA3P29320 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.24■□□□□ 0.35
EPHA3P29320 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.24■□□□□ 0.35
EPHA3P29320 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA3P29320 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA3P29320 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA3P29320 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
EPHA3P29320 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.23■□□□□ 0.35
EPHA3P29320 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
EPHA3P29320 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
EPHA3P29320 PCDHA14-201ENST00000506751 2298 ntBASIC17.23■□□□□ 0.35
EPHA3P29320 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
EPHA3P29320 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
EPHA3P29320 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.23■□□□□ 0.35
EPHA3P29320 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
EPHA3P29320 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
EPHA3P29320 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 AC009947.2-201ENST00000444014 672 ntBASIC17.23■□□□□ 0.35
EPHA3P29320 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.23■□□□□ 0.35
EPHA3P29320 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 MIR3917-201ENST00000580971 93 ntBASIC17.23■□□□□ 0.35
EPHA3P29320 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.23■□□□□ 0.35
EPHA3P29320 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
EPHA3P29320 AC010653.2-201ENST00000623505 997 ntBASIC17.23■□□□□ 0.35
EPHA3P29320 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
EPHA3P29320 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
EPHA3P29320 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
EPHA3P29320 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 PCDHB19P-201ENST00000570871 2371 ntBASIC17.23■□□□□ 0.35
EPHA3P29320 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.23■□□□□ 0.35
EPHA3P29320 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.23■□□□□ 0.35
EPHA3P29320 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
EPHA3P29320 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
EPHA3P29320 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
EPHA3P29320 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EPHA3P29320 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EPHA3P29320 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
EPHA3P29320 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
EPHA3P29320 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
EPHA3P29320 INGX-201ENST00000359239 846 ntBASIC17.22■□□□□ 0.35
EPHA3P29320 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EPHA3P29320 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EPHA3P29320 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
EPHA3P29320 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EPHA3P29320 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.22■□□□□ 0.35
EPHA3P29320 DDX43P3-201ENST00000441064 443 ntBASIC17.22■□□□□ 0.35
EPHA3P29320 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
EPHA3P29320 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.22■□□□□ 0.35
EPHA3P29320 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.22■□□□□ 0.35
EPHA3P29320 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.22■□□□□ 0.35
EPHA3P29320 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EPHA3P29320 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
EPHA3P29320 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.22■□□□□ 0.35
EPHA3P29320 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.22■□□□□ 0.35
EPHA3P29320 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.22■□□□□ 0.35
EPHA3P29320 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
EPHA3P29320 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
EPHA3P29320 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms