Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP24386 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.58■□□□□ 0.24
CHMP24386 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.58■□□□□ 0.24
CHMP24386 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP24386 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP24386 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CHMP24386 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP24386 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHMP24386 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP24386 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP24386 AC022211.2-201ENST00000585075 2527 ntBASIC16.57■□□□□ 0.24
CHMP24386 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP24386 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP24386 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CHMP24386 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CHMP24386 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP24386 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP24386 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP24386 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.57■□□□□ 0.24
CHMP24386 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP24386 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP24386 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP24386 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP24386 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP24386 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CHMP24386 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.57■□□□□ 0.24
CHMP24386 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.57■□□□□ 0.24
CHMP24386 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP24386 AC008687.5-201ENST00000593746 558 ntBASIC16.57■□□□□ 0.24
CHMP24386 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.57■□□□□ 0.24
CHMP24386 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.57■□□□□ 0.24
CHMP24386 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP24386 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP24386 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP24386 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP24386 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP24386 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CHMP24386 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.57■□□□□ 0.24
CHMP24386 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHMP24386 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.57■□□□□ 0.24
CHMP24386 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CHMP24386 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CHMP24386 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP24386 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CHMP24386 AL139384.1-201ENST00000612143 3047 ntBASIC16.56■□□□□ 0.24
CHMP24386 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CHMP24386 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
CHMP24386 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
CHMP24386 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP24386 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CHMP24386 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP24386 KRT89P-201ENST00000620027 1478 ntBASIC16.56■□□□□ 0.24
CHMP24386 AP001094.4-201ENST00000579008 2176 ntBASIC16.56■□□□□ 0.24
CHMP24386 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP24386 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP24386 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP24386 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP24386 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP24386 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.56■□□□□ 0.24
CHMP24386 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.56■□□□□ 0.24
CHMP24386 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.56■□□□□ 0.24
CHMP24386 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
CHMP24386 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.56■□□□□ 0.24
CHMP24386 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CHMP24386 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CHMP24386 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CHMP24386 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.56■□□□□ 0.24
CHMP24386 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP24386 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP24386 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP24386 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.56■□□□□ 0.24
CHMP24386 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.56■□□□□ 0.24
CHMP24386 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
CHMP24386 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP24386 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP24386 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CHMP24386 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CHMP24386 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.55■□□□□ 0.24
CHMP24386 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.55■□□□□ 0.24
CHMP24386 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP24386 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP24386 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP24386 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.55■□□□□ 0.24
CHMP24386 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP24386 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CHMP24386 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP24386 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP24386 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP24386 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP24386 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CHMP24386 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP24386 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP24386 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP24386 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP24386 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP24386 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CHMP24386 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CHMP24386 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.55■□□□□ 0.24
CHMP24386 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.55■□□□□ 0.24
CHMP24386 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms