Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ERCC2P18074 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.22■□□□□ 0.51
ERCC2P18074 NSUN5P1-202ENST00000421140 1535 ntBASIC18.22■□□□□ 0.51
ERCC2P18074 NSUN5P2-203ENST00000457352 1529 ntBASIC18.22■□□□□ 0.51
ERCC2P18074 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC2P18074 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC2P18074 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC2P18074 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC2P18074 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC2P18074 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
ERCC2P18074 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ERCC2P18074 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ERCC2P18074 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ERCC2P18074 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ERCC2P18074 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC2P18074 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.21■□□□□ 0.51
ERCC2P18074 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC2P18074 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.21■□□□□ 0.51
ERCC2P18074 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC2P18074 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC2P18074 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC2P18074 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ERCC2P18074 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC2P18074 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC2P18074 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC2P18074 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC2P18074 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
ERCC2P18074 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.21■□□□□ 0.51
ERCC2P18074 AC005104.2-201ENST00000427818 678 ntBASIC18.21■□□□□ 0.51
ERCC2P18074 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
ERCC2P18074 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC2P18074 AC074051.2-201ENST00000565115 352 ntBASIC18.21■□□□□ 0.51
ERCC2P18074 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.21■□□□□ 0.51
ERCC2P18074 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.21■□□□□ 0.51
ERCC2P18074 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
ERCC2P18074 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
ERCC2P18074 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.21■□□□□ 0.51
ERCC2P18074 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ERCC2P18074 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.21■□□□□ 0.51
ERCC2P18074 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC2P18074 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC2P18074 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC2P18074 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC2P18074 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.21■□□□□ 0.51
ERCC2P18074 LETM1P2-201ENST00000597330 2178 ntBASIC18.21■□□□□ 0.51
ERCC2P18074 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC2P18074 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC2P18074 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
ERCC2P18074 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.21■□□□□ 0.5
ERCC2P18074 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC2P18074 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.2■□□□□ 0.5
ERCC2P18074 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.2■□□□□ 0.5
ERCC2P18074 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.2■□□□□ 0.5
ERCC2P18074 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.2■□□□□ 0.5
ERCC2P18074 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.2■□□□□ 0.5
ERCC2P18074 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ERCC2P18074 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC2P18074 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC2P18074 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.2■□□□□ 0.5
ERCC2P18074 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.2■□□□□ 0.5
ERCC2P18074 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC2P18074 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC2P18074 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC2P18074 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC2P18074 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC2P18074 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC2P18074 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
ERCC2P18074 MINOS1P3-201ENST00000457048 203 ntBASIC18.2■□□□□ 0.5
ERCC2P18074 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.2■□□□□ 0.5
ERCC2P18074 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.2■□□□□ 0.5
ERCC2P18074 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.2■□□□□ 0.5
ERCC2P18074 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.2■□□□□ 0.5
ERCC2P18074 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC2P18074 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.2■□□□□ 0.5
ERCC2P18074 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC2P18074 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC2P18074 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC2P18074 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC2P18074 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC2P18074 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.2■□□□□ 0.5
ERCC2P18074 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC2P18074 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC2P18074 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC2P18074 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.2■□□□□ 0.5
ERCC2P18074 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
ERCC2P18074 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ERCC2P18074 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC2P18074 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC2P18074 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC2P18074 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC2P18074 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC2P18074 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC2P18074 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC2P18074 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC2P18074 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC2P18074 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC2P18074 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.19■□□□□ 0.5
ERCC2P18074 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.19■□□□□ 0.5
ERCC2P18074 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.19■□□□□ 0.5
ERCC2P18074 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms