Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC7.82□□□□□ -1.16
USH2AO75445 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 DFFBP1-201ENST00000433250 979 ntBASIC7.82□□□□□ -1.16
USH2AO75445 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC7.82□□□□□ -1.16
USH2AO75445 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 AL512343.1-201ENST00000605837 169 ntBASIC7.82□□□□□ -1.16
USH2AO75445 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC7.82□□□□□ -1.16
USH2AO75445 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
USH2AO75445 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC7.82□□□□□ -1.16
USH2AO75445 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC7.82□□□□□ -1.16
USH2AO75445 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC7.82□□□□□ -1.16
USH2AO75445 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC7.81□□□□□ -1.16
USH2AO75445 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
USH2AO75445 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 CD81-202ENST00000381036 880 ntTSL 3 BASIC7.81□□□□□ -1.16
USH2AO75445 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC7.81□□□□□ -1.16
USH2AO75445 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
USH2AO75445 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC7.81□□□□□ -1.16
USH2AO75445 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
USH2AO75445 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
USH2AO75445 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC7.81□□□□□ -1.16
USH2AO75445 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC7.81□□□□□ -1.16
USH2AO75445 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC7.81□□□□□ -1.16
USH2AO75445 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC7.81□□□□□ -1.16
USH2AO75445 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC7.81□□□□□ -1.16
USH2AO75445 LINC00982-205ENST00000420957 435 ntBASIC7.81□□□□□ -1.16
USH2AO75445 S100A2-206ENST00000497140 697 ntTSL 2 BASIC7.81□□□□□ -1.16
USH2AO75445 SLC25A6P2-201ENST00000497974 877 ntBASIC7.81□□□□□ -1.16
USH2AO75445 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC7.81□□□□□ -1.16
USH2AO75445 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC7.81□□□□□ -1.16
USH2AO75445 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC7.81□□□□□ -1.16
USH2AO75445 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC7.81□□□□□ -1.16
USH2AO75445 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC7.81□□□□□ -1.16
USH2AO75445 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC7.81□□□□□ -1.16
USH2AO75445 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC7.81□□□□□ -1.16
USH2AO75445 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 UXT-AS1-201ENST00000590504 1525 ntBASIC7.81□□□□□ -1.16
USH2AO75445 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
USH2AO75445 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
USH2AO75445 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
USH2AO75445 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
USH2AO75445 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC7.81□□□□□ -1.16
USH2AO75445 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
USH2AO75445 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 AC099548.2-209ENST00000480264 625 ntBASIC7.81□□□□□ -1.16
USH2AO75445 AC027369.6-201ENST00000525520 931 ntBASIC7.81□□□□□ -1.16
USH2AO75445 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
USH2AO75445 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC7.81□□□□□ -1.16
USH2AO75445 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC7.81□□□□□ -1.16
USH2AO75445 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
USH2AO75445 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
USH2AO75445 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC7.8□□□□□ -1.16
USH2AO75445 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
USH2AO75445 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC7.8□□□□□ -1.16
USH2AO75445 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC7.8□□□□□ -1.16
USH2AO75445 KRT223P-202ENST00000449164 1292 ntBASIC7.8□□□□□ -1.16
USH2AO75445 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC7.8□□□□□ -1.16
USH2AO75445 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC7.8□□□□□ -1.16
USH2AO75445 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
USH2AO75445 AP000842.3-202ENST00000569238 1080 ntBASIC7.8□□□□□ -1.16
USH2AO75445 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC7.8□□□□□ -1.16
USH2AO75445 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC7.8□□□□□ -1.16
USH2AO75445 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC7.8□□□□□ -1.16
USH2AO75445 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
USH2AO75445 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
USH2AO75445 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC7.8□□□□□ -1.16
USH2AO75445 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
USH2AO75445 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
USH2AO75445 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
USH2AO75445 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
USH2AO75445 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC7.8□□□□□ -1.16
USH2AO75445 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC7.8□□□□□ -1.16
USH2AO75445 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
USH2AO75445 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
USH2AO75445 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC7.8□□□□□ -1.16
USH2AO75445 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC7.8□□□□□ -1.16
USH2AO75445 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC7.8□□□□□ -1.16
USH2AO75445 RPS15-212ENST00000593052 629 ntTSL 2 BASIC7.8□□□□□ -1.16
USH2AO75445 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
USH2AO75445 MIR6080-201ENST00000617359 66 ntBASIC7.8□□□□□ -1.16
USH2AO75445 PFAS-212ENST00000625942 396 ntTSL 5 BASIC7.8□□□□□ -1.16
USH2AO75445 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms