Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRIM3O75382 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.54■□□□□ 0.24
TRIM3O75382 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.54■□□□□ 0.24
TRIM3O75382 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TRIM3O75382 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM3O75382 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.53■□□□□ 0.24
TRIM3O75382 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM3O75382 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRIM3O75382 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM3O75382 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM3O75382 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM3O75382 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.53■□□□□ 0.24
TRIM3O75382 AC124864.1-201ENST00000623408 392 ntBASIC16.53■□□□□ 0.24
TRIM3O75382 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM3O75382 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
TRIM3O75382 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRIM3O75382 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM3O75382 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM3O75382 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
TRIM3O75382 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRIM3O75382 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.53■□□□□ 0.24
TRIM3O75382 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRIM3O75382 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM3O75382 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM3O75382 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM3O75382 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM3O75382 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM3O75382 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM3O75382 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TRIM3O75382 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM3O75382 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRIM3O75382 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM3O75382 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM3O75382 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TRIM3O75382 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM3O75382 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM3O75382 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM3O75382 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM3O75382 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM3O75382 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM3O75382 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.52■□□□□ 0.24
TRIM3O75382 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM3O75382 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.52■□□□□ 0.24
TRIM3O75382 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM3O75382 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TRIM3O75382 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.52■□□□□ 0.24
TRIM3O75382 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.52■□□□□ 0.24
TRIM3O75382 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.52■□□□□ 0.24
TRIM3O75382 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.52■□□□□ 0.24
TRIM3O75382 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRIM3O75382 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM3O75382 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM3O75382 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM3O75382 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM3O75382 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.52■□□□□ 0.23
TRIM3O75382 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.52■□□□□ 0.23
TRIM3O75382 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRIM3O75382 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM3O75382 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRIM3O75382 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRIM3O75382 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TRIM3O75382 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.51■□□□□ 0.23
TRIM3O75382 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRIM3O75382 TOB2P1-201ENST00000469761 992 ntBASIC16.51■□□□□ 0.23
TRIM3O75382 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.51■□□□□ 0.23
TRIM3O75382 CLEC4GP1-201ENST00000596555 870 ntBASIC16.51■□□□□ 0.23
TRIM3O75382 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms