Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.19■□□□□ 0.66
EXTL3O43909 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.19■□□□□ 0.66
EXTL3O43909 AL049757.1-201ENST00000616842 1596 ntBASIC19.19■□□□□ 0.66
EXTL3O43909 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXTL3O43909 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.19■□□□□ 0.66
EXTL3O43909 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
EXTL3O43909 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EXTL3O43909 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EXTL3O43909 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXTL3O43909 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXTL3O43909 HLA-J-201ENST00000462773 1622 ntBASIC19.19■□□□□ 0.66
EXTL3O43909 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.19■□□□□ 0.66
EXTL3O43909 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXTL3O43909 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXTL3O43909 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXTL3O43909 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.19■□□□□ 0.66
EXTL3O43909 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.19■□□□□ 0.66
EXTL3O43909 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.19■□□□□ 0.66
EXTL3O43909 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.19■□□□□ 0.66
EXTL3O43909 AL732292.2-201ENST00000609649 430 ntBASIC19.19■□□□□ 0.66
EXTL3O43909 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.19■□□□□ 0.66
EXTL3O43909 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EXTL3O43909 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXTL3O43909 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXTL3O43909 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EXTL3O43909 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.19■□□□□ 0.66
EXTL3O43909 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXTL3O43909 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
EXTL3O43909 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.19■□□□□ 0.66
EXTL3O43909 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.19■□□□□ 0.66
EXTL3O43909 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
EXTL3O43909 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
EXTL3O43909 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EXTL3O43909 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
EXTL3O43909 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXTL3O43909 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXTL3O43909 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXTL3O43909 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.18■□□□□ 0.66
EXTL3O43909 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EXTL3O43909 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXTL3O43909 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXTL3O43909 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.18■□□□□ 0.66
EXTL3O43909 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXTL3O43909 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EXTL3O43909 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.18■□□□□ 0.66
EXTL3O43909 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.18■□□□□ 0.66
EXTL3O43909 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.18■□□□□ 0.66
EXTL3O43909 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.18■□□□□ 0.66
EXTL3O43909 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.18■□□□□ 0.66
EXTL3O43909 AC109462.3-201ENST00000573934 613 ntBASIC19.18■□□□□ 0.66
EXTL3O43909 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXTL3O43909 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
EXTL3O43909 AD001527.2-201ENST00000622994 785 ntBASIC19.18■□□□□ 0.66
EXTL3O43909 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
EXTL3O43909 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXTL3O43909 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
EXTL3O43909 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EXTL3O43909 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EXTL3O43909 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXTL3O43909 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.18■□□□□ 0.66
EXTL3O43909 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
EXTL3O43909 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXTL3O43909 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
EXTL3O43909 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.18■□□□□ 0.66
EXTL3O43909 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
EXTL3O43909 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXTL3O43909 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EXTL3O43909 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXTL3O43909 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
EXTL3O43909 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXTL3O43909 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXTL3O43909 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
EXTL3O43909 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EXTL3O43909 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.17■□□□□ 0.66
EXTL3O43909 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXTL3O43909 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EXTL3O43909 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC19.17■□□□□ 0.66
EXTL3O43909 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.17■□□□□ 0.66
EXTL3O43909 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.17■□□□□ 0.66
EXTL3O43909 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.17■□□□□ 0.66
EXTL3O43909 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
EXTL3O43909 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EXTL3O43909 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
EXTL3O43909 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXTL3O43909 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
EXTL3O43909 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EXTL3O43909 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXTL3O43909 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXTL3O43909 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXTL3O43909 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.17■□□□□ 0.66
EXTL3O43909 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXTL3O43909 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EXTL3O43909 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
EXTL3O43909 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXTL3O43909 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.17■□□□□ 0.66
EXTL3O43909 KRT8P10-201ENST00000450021 1447 ntBASIC19.17■□□□□ 0.66
EXTL3O43909 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.16■□□□□ 0.66
EXTL3O43909 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
EXTL3O43909 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
EXTL3O43909 AL353593.2-201ENST00000602529 1483 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms