Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.83■□□□□ 0.28
PROM1O43490 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PROM1O43490 AC097374.2-201ENST00000618617 1306 ntBASIC16.83■□□□□ 0.28
PROM1O43490 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.83■□□□□ 0.28
PROM1O43490 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.83■□□□□ 0.28
PROM1O43490 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PROM1O43490 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PROM1O43490 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PROM1O43490 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.82■□□□□ 0.28
PROM1O43490 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.82■□□□□ 0.28
PROM1O43490 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PROM1O43490 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.82■□□□□ 0.28
PROM1O43490 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
PROM1O43490 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PROM1O43490 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PROM1O43490 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PROM1O43490 TPM4P1-201ENST00000436100 807 ntBASIC16.82■□□□□ 0.28
PROM1O43490 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PROM1O43490 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PROM1O43490 KRT126P-201ENST00000549467 1181 ntBASIC16.82■□□□□ 0.28
PROM1O43490 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
PROM1O43490 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.82■□□□□ 0.28
PROM1O43490 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PROM1O43490 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.82■□□□□ 0.28
PROM1O43490 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PROM1O43490 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.82■□□□□ 0.28
PROM1O43490 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.82■□□□□ 0.28
PROM1O43490 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.82■□□□□ 0.28
PROM1O43490 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PROM1O43490 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PROM1O43490 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.82■□□□□ 0.28
PROM1O43490 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PROM1O43490 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PROM1O43490 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.81■□□□□ 0.28
PROM1O43490 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.81■□□□□ 0.28
PROM1O43490 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PROM1O43490 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PROM1O43490 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
PROM1O43490 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
PROM1O43490 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.81■□□□□ 0.28
PROM1O43490 AP002383.4-201ENST00000442518 975 ntBASIC16.81■□□□□ 0.28
PROM1O43490 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PROM1O43490 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PROM1O43490 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PROM1O43490 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PROM1O43490 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.81■□□□□ 0.28
PROM1O43490 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PROM1O43490 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PROM1O43490 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PROM1O43490 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PROM1O43490 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PROM1O43490 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.81■□□□□ 0.28
PROM1O43490 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PROM1O43490 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PROM1O43490 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PROM1O43490 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.8■□□□□ 0.28
PROM1O43490 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.8■□□□□ 0.28
PROM1O43490 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.8■□□□□ 0.28
PROM1O43490 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PROM1O43490 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.8■□□□□ 0.28
PROM1O43490 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.8■□□□□ 0.28
PROM1O43490 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PROM1O43490 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PROM1O43490 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PROM1O43490 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PROM1O43490 KRT18P1-202ENST00000452408 1331 ntBASIC16.8■□□□□ 0.28
PROM1O43490 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PROM1O43490 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PROM1O43490 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PROM1O43490 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PROM1O43490 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.8■□□□□ 0.28
PROM1O43490 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.8■□□□□ 0.28
PROM1O43490 AC246785.2-201ENST00000432512 513 ntBASIC16.8■□□□□ 0.28
PROM1O43490 DRAXINP1-201ENST00000437611 948 ntBASIC16.8■□□□□ 0.28
PROM1O43490 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.8■□□□□ 0.28
PROM1O43490 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.8■□□□□ 0.28
PROM1O43490 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.8■□□□□ 0.28
PROM1O43490 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.8■□□□□ 0.28
PROM1O43490 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.8■□□□□ 0.28
PROM1O43490 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PROM1O43490 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms