Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PFDN6O15212 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.77■□□□□ 0.44
PFDN6O15212 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.77■□□□□ 0.44
PFDN6O15212 HYMAI.1-201ENST00000620949 238 ntBASIC17.77■□□□□ 0.44
PFDN6O15212 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.77■□□□□ 0.44
PFDN6O15212 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
PFDN6O15212 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PFDN6O15212 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PFDN6O15212 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PFDN6O15212 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PFDN6O15212 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
PFDN6O15212 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PFDN6O15212 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PFDN6O15212 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
PFDN6O15212 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.77■□□□□ 0.43
PFDN6O15212 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PFDN6O15212 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PFDN6O15212 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PFDN6O15212 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.77■□□□□ 0.43
PFDN6O15212 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
PFDN6O15212 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PFDN6O15212 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PFDN6O15212 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN6O15212 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN6O15212 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PFDN6O15212 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PFDN6O15212 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN6O15212 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN6O15212 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN6O15212 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.76■□□□□ 0.43
PFDN6O15212 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN6O15212 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.76■□□□□ 0.43
PFDN6O15212 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN6O15212 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN6O15212 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN6O15212 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.76■□□□□ 0.43
PFDN6O15212 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN6O15212 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN6O15212 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.76■□□□□ 0.43
PFDN6O15212 GUSBP12-201ENST00000513727 720 ntBASIC17.76■□□□□ 0.43
PFDN6O15212 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN6O15212 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
PFDN6O15212 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN6O15212 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.76■□□□□ 0.43
PFDN6O15212 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN6O15212 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN6O15212 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.76■□□□□ 0.43
PFDN6O15212 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN6O15212 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
PFDN6O15212 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.76■□□□□ 0.43
PFDN6O15212 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN6O15212 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PFDN6O15212 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PFDN6O15212 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PFDN6O15212 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.76■□□□□ 0.43
PFDN6O15212 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
PFDN6O15212 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.75■□□□□ 0.43
PFDN6O15212 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN6O15212 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PFDN6O15212 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.75■□□□□ 0.43
PFDN6O15212 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN6O15212 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN6O15212 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN6O15212 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN6O15212 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN6O15212 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PFDN6O15212 AL645929.1-201ENST00000420084 975 ntBASIC17.75■□□□□ 0.43
PFDN6O15212 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN6O15212 VENTXP5-201ENST00000523979 775 ntBASIC17.75■□□□□ 0.43
PFDN6O15212 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN6O15212 AL390719.2-201ENST00000606993 987 ntBASIC17.75■□□□□ 0.43
PFDN6O15212 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.75■□□□□ 0.43
PFDN6O15212 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN6O15212 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN6O15212 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN6O15212 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN6O15212 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
PFDN6O15212 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN6O15212 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN6O15212 Z83836.1-201ENST00000624605 1642 ntBASIC17.75■□□□□ 0.43
PFDN6O15212 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN6O15212 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.75■□□□□ 0.43
PFDN6O15212 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN6O15212 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.75■□□□□ 0.43
PFDN6O15212 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN6O15212 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
PFDN6O15212 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PFDN6O15212 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PFDN6O15212 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PFDN6O15212 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PFDN6O15212 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PFDN6O15212 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PFDN6O15212 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PFDN6O15212 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.74■□□□□ 0.43
PFDN6O15212 BX276092.7-203ENST00000637198 1536 ntBASIC17.74■□□□□ 0.43
PFDN6O15212 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.74■□□□□ 0.43
PFDN6O15212 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.74■□□□□ 0.43
PFDN6O15212 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.74■□□□□ 0.43
PFDN6O15212 MTCL1P1-201ENST00000446207 792 ntBASIC17.74■□□□□ 0.43
PFDN6O15212 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms