Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 BX276092.7-203ENST00000637198 1536 ntBASIC12.49□□□□□ -0.41
LINC01546A6NGU7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 MIR663A-201ENST00000385250 93 ntBASIC12.49□□□□□ -0.41
LINC01546A6NGU7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 RPS2P4-201ENST00000476944 856 ntBASIC12.49□□□□□ -0.41
LINC01546A6NGU7 CA15P1-201ENST00000481698 905 ntBASIC12.49□□□□□ -0.41
LINC01546A6NGU7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 AC073111.5-205ENST00000641717 521 ntBASIC12.49□□□□□ -0.41
LINC01546A6NGU7 AL031985.4-201ENST00000642138 673 ntBASIC12.49□□□□□ -0.41
LINC01546A6NGU7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 AC126177.1-201ENST00000547829 2218 ntBASIC12.49□□□□□ -0.41
LINC01546A6NGU7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC01546A6NGU7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 KRT16P1-201ENST00000399124 1418 ntBASIC12.48□□□□□ -0.41
LINC01546A6NGU7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 AC096733.2-201ENST00000609937 1394 ntBASIC12.48□□□□□ -0.41
LINC01546A6NGU7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 AL355355.2-201ENST00000442321 338 ntBASIC12.48□□□□□ -0.41
LINC01546A6NGU7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 AC083906.2-201ENST00000511578 360 ntBASIC12.48□□□□□ -0.41
LINC01546A6NGU7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 AP000692.2-201ENST00000608391 879 ntBASIC12.48□□□□□ -0.41
LINC01546A6NGU7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC01546A6NGU7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC12.47□□□□□ -0.41
LINC01546A6NGU7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms