Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 AL157888.1-201ENST00000631930 593 ntBASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRAV30A0A087WSZ9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 AC133963.1-201ENST00000504166 1679 ntBASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV30A0A087WSZ9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV30A0A087WSZ9 LINC00167-201ENST00000530583 1419 ntBASIC13.96□□□□□ -0.18
TRAV30A0A087WSZ9 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV30A0A087WSZ9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
TRAV30A0A087WSZ9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
TRAV30A0A087WSZ9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV30A0A087WSZ9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV30A0A087WSZ9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV30A0A087WSZ9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV30A0A087WSZ9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.96□□□□□ -0.18
TRAV30A0A087WSZ9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 DDX43P3-201ENST00000441064 443 ntBASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 TSPY15P-201ENST00000457163 923 ntBASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 LINC01451-201ENST00000623792 534 ntBASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 LINC00602-201ENST00000629776 2065 ntBASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 AL138688.1-201ENST00000624851 1594 ntBASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 CICP6-201ENST00000457191 2729 ntBASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.95□□□□□ -0.18
TRAV30A0A087WSZ9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 AC068418.2-201ENST00000577309 3703 ntBASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV30A0A087WSZ9 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms