Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDHGA3Q9Y5H0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA3Q9Y5H0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA3Q9Y5H0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA3Q9Y5H0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA3Q9Y5H0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA3Q9Y5H0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA3Q9Y5H0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA3Q9Y5H0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHGA3Q9Y5H0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PCDHGA3Q9Y5H0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDHGA3Q9Y5H0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHGA3Q9Y5H0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
PCDHGA3Q9Y5H0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 AL031284.1-201ENST00000419297 478 ntBASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 AL671883.3-201ENST00000603274 991 ntBASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 BCL2-203ENST00000589955 5011 ntBASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
PCDHGA3Q9Y5H0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 IL9RP2-201ENST00000423948 1312 ntBASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 AC132008.2-207ENST00000454517 770 ntBASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 AC068472.1-201ENST00000474589 881 ntBASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 AC008608.2-201ENST00000606089 416 ntBASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PCDHGA3Q9Y5H0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 AC112777.1-201ENST00000540175 1423 ntBASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHGA3Q9Y5H0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms