Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 AC009949.1-201ENST00000623048 1830 ntBASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 FAM8A6P-201ENST00000407496 1135 ntBASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF11Q9Y3C5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 KRT8P47-201ENST00000604727 1398 ntBASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 AK4P3-201ENST00000418260 669 ntBASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 AL359075.1-203ENST00000462729 1002 ntBASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 LINC01023-201ENST00000606054 436 ntBASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF11Q9Y3C5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF11Q9Y3C5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms