Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 UPK3BP1-201ENST00000428678 509 ntBASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 AC074051.2-201ENST00000565115 352 ntBASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGC3Q9UN70 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 MINOS1P3-201ENST00000457048 203 ntBASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 AC104819.1-201ENST00000504587 486 ntBASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 AP000867.3-201ENST00000524675 377 ntBASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 AL139327.4-201ENST00000612362 153 ntBASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 AC093458.2-201ENST00000623150 629 ntBASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 SIRPAP1-201ENST00000448467 1770 ntBASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 LYSMD4-203ENST00000378904 2122 ntBASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGC3Q9UN70 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 INTS4P1-201ENST00000438455 1935 ntBASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 MYCLP1-201ENST00000372451 1075 ntBASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 POM121L3P-201ENST00000419331 1163 ntBASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 AC109462.3-201ENST00000573934 613 ntBASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGC3Q9UN70 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGC3Q9UN70 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms