Protein–RNA interactions for Protein: Q9UGU5

HMGXB4, HMG domain-containing protein 4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4Q9UGU5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HMGXB4Q9UGU5 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HMGXB4Q9UGU5 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
HMGXB4Q9UGU5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 AL049757.1-201ENST00000616842 1596 ntBASIC18.81■□□□□ 0.6
HMGXB4Q9UGU5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 GNAS-203ENST00000306120 1878 ntBASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 AL121894.2-201ENST00000602977 491 ntBASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.8■□□□□ 0.6
HMGXB4Q9UGU5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 EMBP1-201ENST00000458200 901 ntBASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 AC111152.3-201ENST00000569699 673 ntBASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 AL691432.3-201ENST00000621860 400 ntBASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 KRT8P10-201ENST00000450021 1447 ntBASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HMGXB4Q9UGU5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.78■□□□□ 0.6
HMGXB4Q9UGU5 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGXB4Q9UGU5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HMGXB4Q9UGU5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGXB4Q9UGU5 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGXB4Q9UGU5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HMGXB4Q9UGU5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.78■□□□□ 0.6
HMGXB4Q9UGU5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.78■□□□□ 0.6
HMGXB4Q9UGU5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms