Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 AL645929.1-201ENST00000420084 975 ntBASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 VENTXP5-201ENST00000523979 775 ntBASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 AL136038.3-201ENST00000561909 1096 ntBASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 GPR32P1-201ENST00000601788 811 ntBASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
LINC00474Q9P2X8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
LINC00474Q9P2X8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
LINC00474Q9P2X8 ABALON-201ENST00000629058 1903 ntBASIC11.58□□□□□ -0.55
LINC00474Q9P2X8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 KRT18P65-201ENST00000439811 1286 ntBASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 MNT-208ENST00000575394 606 ntTSL 4 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 AC091076.1-201ENST00000610741 619 ntBASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC00474Q9P2X8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms