Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 AC079328.2-201ENST00000561241 3354 ntBASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 LINC00528-201ENST00000600723 2160 ntBASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
CDC42SE1Q9NRR8 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC9.04□□□□□ -0.96
CDC42SE1Q9NRR8 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 AP001271.2-201ENST00000624018 1556 ntBASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 UBQLN4P1-201ENST00000461599 1801 ntBASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC9.03□□□□□ -0.96
CDC42SE1Q9NRR8 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms