Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRIM62Q9BVG3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TRIM62Q9BVG3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
TRIM62Q9BVG3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.46■□□□□ 0.54
TRIM62Q9BVG3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TRIM62Q9BVG3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 RBM17P3-201ENST00000417687 1192 ntBASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 DUSP5P1-201ENST00000441325 1139 ntBASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 NOC2LP2-201ENST00000407594 1944 ntBASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
TRIM62Q9BVG3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 AL450487.1-201ENST00000426799 995 ntBASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM62Q9BVG3 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms