Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.35■□□□□ 0.53
HAPLN3Q96S86 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.35■□□□□ 0.53
HAPLN3Q96S86 AC012317.2-201ENST00000623305 2251 ntBASIC18.35■□□□□ 0.53
HAPLN3Q96S86 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.35■□□□□ 0.53
HAPLN3Q96S86 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HAPLN3Q96S86 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.35■□□□□ 0.53
HAPLN3Q96S86 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
HAPLN3Q96S86 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HAPLN3Q96S86 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
HAPLN3Q96S86 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 KRT16P4-201ENST00000453883 522 ntBASIC18.34■□□□□ 0.53
HAPLN3Q96S86 AC096582.2-201ENST00000510860 516 ntBASIC18.34■□□□□ 0.53
HAPLN3Q96S86 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 AC114341.1-201ENST00000618070 349 ntBASIC18.34■□□□□ 0.53
HAPLN3Q96S86 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 AC141586.5-201ENST00000624546 2050 ntBASIC18.34■□□□□ 0.53
HAPLN3Q96S86 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.34■□□□□ 0.53
HAPLN3Q96S86 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.33■□□□□ 0.53
HAPLN3Q96S86 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
HAPLN3Q96S86 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
HAPLN3Q96S86 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HAPLN3Q96S86 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HAPLN3Q96S86 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.33■□□□□ 0.53
HAPLN3Q96S86 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.33■□□□□ 0.53
HAPLN3Q96S86 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.33■□□□□ 0.53
HAPLN3Q96S86 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
HAPLN3Q96S86 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
HAPLN3Q96S86 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
HAPLN3Q96S86 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HAPLN3Q96S86 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HAPLN3Q96S86 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.33■□□□□ 0.52
HAPLN3Q96S86 RCN1P2-201ENST00000398357 915 ntBASIC18.33■□□□□ 0.52
HAPLN3Q96S86 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.33■□□□□ 0.52
HAPLN3Q96S86 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.33■□□□□ 0.52
HAPLN3Q96S86 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.33■□□□□ 0.52
HAPLN3Q96S86 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.33■□□□□ 0.52
HAPLN3Q96S86 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.33■□□□□ 0.52
HAPLN3Q96S86 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.33■□□□□ 0.52
HAPLN3Q96S86 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.33■□□□□ 0.52
HAPLN3Q96S86 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.33■□□□□ 0.52
HAPLN3Q96S86 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HAPLN3Q96S86 INTS4P1-201ENST00000438455 1935 ntBASIC18.33■□□□□ 0.52
HAPLN3Q96S86 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HAPLN3Q96S86 GNAS-203ENST00000306120 1878 ntBASIC18.33■□□□□ 0.52
HAPLN3Q96S86 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
HAPLN3Q96S86 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HAPLN3Q96S86 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.33■□□□□ 0.52
HAPLN3Q96S86 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.52
HAPLN3Q96S86 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 AC103564.2-201ENST00000432853 1299 ntBASIC18.32■□□□□ 0.52
HAPLN3Q96S86 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 LINC01451-201ENST00000623792 534 ntBASIC18.32■□□□□ 0.52
HAPLN3Q96S86 AC134043.2-201ENST00000624206 2238 ntBASIC18.32■□□□□ 0.52
HAPLN3Q96S86 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HAPLN3Q96S86 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HAPLN3Q96S86 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.31■□□□□ 0.52
HAPLN3Q96S86 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms