Protein–RNA interactions for Protein: Q96LY2

CCDC74B, Coiled-coil domain-containing protein 74B, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC74BQ96LY2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC74BQ96LY2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 AC018445.3-201ENST00000624177 1945 ntBASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 DDX43P3-201ENST00000441064 443 ntBASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC74BQ96LY2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 REXO1L9P-201ENST00000604264 2108 ntBASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 AC004832.2-201ENST00000426397 482 ntBASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 AC112482.1-201ENST00000492080 688 ntBASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 IGHV3-52-201ENST00000519770 353 ntBASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 MIR4751-201ENST00000578027 74 ntBASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 AC093503.3-201ENST00000624917 2352 ntBASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC74BQ96LY2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC74BQ96LY2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms