Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 COX5BP8-201ENST00000416911 349 ntBASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 AC004890.2-204ENST00000481968 304 ntBASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.83□□□□□ -0.52
ALMS1Q8TCU4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 RN7SL692P-201ENST00000464677 288 ntBASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 GPR53P-205ENST00000457298 1084 ntBASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 GATB-205ENST00000508611 605 ntTSL 2 BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 IGHV3-71-201ENST00000523324 359 ntBASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 LINC01225-203ENST00000563550 1244 ntBASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 AC026150.2-201ENST00000564693 1156 ntBASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 CXCL1P1-201ENST00000502804 216 ntBASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 AC243562.1-201ENST00000560672 389 ntBASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ALMS1Q8TCU4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 STK19B-204ENST00000512515 211 ntBASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 CD81-202ENST00000381036 880 ntTSL 3 BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 ATP5G2P4-201ENST00000442175 420 ntBASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 AC107918.2-201ENST00000530817 355 ntBASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 RARRES2P8-201ENST00000566335 367 ntBASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
ALMS1Q8TCU4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 AC005237.2-201ENST00000434368 219 ntBASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 CR383656.12-201ENST00000549567 513 ntBASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
ALMS1Q8TCU4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms