Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC016734.2-201ENST00000624325 1377 ntBASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PCDH19Q8TAB3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 AC005104.2-201ENST00000427818 678 ntBASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 AC005336.2-201ENST00000593183 939 ntBASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDH19Q8TAB3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 AC125634.1-201ENST00000438758 1403 ntBASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDH19Q8TAB3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDH19Q8TAB3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms