Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 IGF2BP2-201ENST00000346192 3291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 ZNF436-AS1-201ENST00000335648 2547 ntBASIC11.03□□□□□ -0.64
SVIPQ8NHG7 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 AL445531.1-201ENST00000562653 1728 ntBASIC11.03□□□□□ -0.64
SVIPQ8NHG7 AL391121.1-201ENST00000607967 1349 ntBASIC11.03□□□□□ -0.64
SVIPQ8NHG7 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 CCBE1-202ENST00000439986 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SVIPQ8NHG7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
SVIPQ8NHG7 AC132938.5-201ENST00000624980 1813 ntBASIC11.02□□□□□ -0.64
SVIPQ8NHG7 AC098614.1-202ENST00000634895 1830 ntBASIC11.02□□□□□ -0.64
SVIPQ8NHG7 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SVIPQ8NHG7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
SVIPQ8NHG7 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SVIPQ8NHG7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.64
SVIPQ8NHG7 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
SVIPQ8NHG7 RNF145-209ENST00000520638 2340 ntTSL 2 BASIC11.02□□□□□ -0.64
SVIPQ8NHG7 AC092139.4-201ENST00000624318 2794 ntBASIC11.02□□□□□ -0.64
SVIPQ8NHG7 ZRSR1-201ENST00000391338 1673 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
SVIPQ8NHG7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC11.02□□□□□ -0.64
SVIPQ8NHG7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 AL135925.1-201ENST00000605920 1701 ntBASIC11.02□□□□□ -0.65
SVIPQ8NHG7 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 VIT-208ENST00000497382 2650 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 FAM177A1-203ENST00000396472 3254 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 TMEM220-201ENST00000341871 3106 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 AC083964.2-201ENST00000623988 2396 ntBASIC11.02□□□□□ -0.65
SVIPQ8NHG7 EEF2-201ENST00000309311 3164 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SVIPQ8NHG7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 PHACTR3-201ENST00000355648 2247 ntTSL 2 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 LIMCH1-213ENST00000511496 3439 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 MICA-210ENST00000616296 2260 ntTSL 5 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC11.01□□□□□ -0.65
SVIPQ8NHG7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms