RNA–Protein interactions for RNA: ENST00000497382.5

VIT-208, Transcript of vitrin, humanhuman

TSL 1 (best) BASIC

Gene VIT, Length 2,650 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIT-208ENST00000497382 NISCHQ9Y2I1 1504 aa18.43■□□□□ 0.54
VIT-208ENST00000497382 SLC24A1O60721 1099 aa18.03■□□□□ 0.48
VIT-208ENST00000497382 MYT1Q01538 1121 aa17.75■□□□□ 0.43
VIT-208ENST00000497382 PELP1Q8IZL8 1130 aaKnown RBP17.73■□□□□ 0.43
VIT-208ENST00000497382 TTBK1Q5TCY1 1321 aaPredicted RBP17.32■□□□□ 0.36
VIT-208ENST00000497382 PRKCSHP14314 528 aaPredicted RBP17.13■□□□□ 0.33
VIT-208ENST00000497382 ABCC9O60706 1549 aa17.1■□□□□ 0.33
VIT-208ENST00000497382 CCDC180Q9P1Z9 1646 aa16.9■□□□□ 0.3
VIT-208ENST00000497382 APLP2Q06481 763 aa16.85■□□□□ 0.29
VIT-208ENST00000497382 DAXXQ9UER7 740 aaPredicted RBP16.8■□□□□ 0.28
VIT-208ENST00000497382 ERICH6Q7L0X2 663 aa16.74■□□□□ 0.27
VIT-208ENST00000497382 DNAJC5BQ9UF47 199 aa16.39■□□□□ 0.21
VIT-208ENST00000497382 RB1CC1Q8TDY2 1594 aa16.26■□□□□ 0.19
VIT-208ENST00000497382 NACADO15069 1562 aa16.06■□□□□ 0.16
VIT-208ENST00000497382 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
VIT-208ENST00000497382 BCL11AQ9H165 835 aa15.92■□□□□ 0.14
VIT-208ENST00000497382 EIF5BO60841 1220 aaKnown RBP15.9■□□□□ 0.14
VIT-208ENST00000497382 PLPPR3Q6T4P5 718 aa15.84■□□□□ 0.13
VIT-208ENST00000497382 UNC13AQ9UPW8 1703 aa15.82■□□□□ 0.12
VIT-208ENST00000497382 EHMT2Q96KQ7 1210 aa15.77■□□□□ 0.12
VIT-208ENST00000497382 MYO15BQ96JP2 1530 aa15.76■□□□□ 0.11
VIT-208ENST00000497382 PABPN1Q86U42 306 aaKnown RBP eCLIP15.75■□□□□ 0.11
VIT-208ENST00000497382 RTN4Q9NQC3 1192 aaKnown RBP15.73■□□□□ 0.11
VIT-208ENST00000497382 BICRAQ9NZM4 1560 aa15.72■□□□□ 0.11
VIT-208ENST00000497382 SHROOM4Q9ULL8 1493 aa15.71■□□□□ 0.1
VIT-208ENST00000497382 FAM9AQ8IZU1 332 aaPredicted RBP15.66■□□□□ 0.1
VIT-208ENST00000497382 PLEKHG5O94827 1062 aa15.57■□□□□ 0.08
VIT-208ENST00000497382 DNAJC5Q9H3Z4 198 aa15.56■□□□□ 0.08
VIT-208ENST00000497382 CECR2Q9BXF3 1484 aa15.53■□□□□ 0.08
VIT-208ENST00000497382 CC2D2AQ9P2K1 1620 aa15.52■□□□□ 0.07
VIT-208ENST00000497382 DCAF8L2P0C7V8 631 aa15.48■□□□□ 0.07
VIT-208ENST00000497382 ARXQ96QS3 562 aa15.48■□□□□ 0.07
VIT-208ENST00000497382 TIMELESSQ9UNS1 1208 aa15.41■□□□□ 0.06
VIT-208ENST00000497382 EIF4G1Q04637 1599 aaKnown RBP15.39■□□□□ 0.05
VIT-208ENST00000497382 KLHL34Q8N239 644 aa15.37■□□□□ 0.05
VIT-208ENST00000497382 DCAF1Q9Y4B6 1507 aa15.35■□□□□ 0.05
VIT-208ENST00000497382 RANGAP1P46060 587 aaPredicted RBP15.33■□□□□ 0.04
VIT-208ENST00000497382 SCAF1Q9H7N4 1312 aaKnown RBP15.27■□□□□ 0.03
VIT-208ENST00000497382 HRCP23327 699 aa15.22■□□□□ 0.03
VIT-208ENST00000497382 ZCCHC6Q5VYS8 1495 aaKnown RBP15.19■□□□□ 0.02
VIT-208ENST00000497382 CUX2O14529 1486 aa15.15■□□□□ 0.02
VIT-208ENST00000497382 PODXL2Q9NZ53 605 aa15.15■□□□□ 0.02
VIT-208ENST00000497382 SCRIBQ14160 1630 aa15.14■□□□□ 0.01
VIT-208ENST00000497382 CENPBP07199 599 aaPredicted RBP15.11■□□□□ 0.01
VIT-208ENST00000497382 TULP1O00294 542 aaPredicted RBP15.1■□□□□ 0.01
VIT-208ENST00000497382 AMER1Q5JTC6 1135 aaPredicted RBP15.03■□□□□ -0
VIT-208ENST00000497382 HOMEZQ8IX15 550 aa14.97□□□□□ -0.01
VIT-208ENST00000497382 UBE2Q2Q8WVN8 375 aa14.96□□□□□ -0.02
VIT-208ENST00000497382 ERCC6Q03468 1493 aa14.86□□□□□ -0.03
VIT-208ENST00000497382 AEBP2Q6ZN18 517 aaPredicted RBP14.82□□□□□ -0.04
VIT-208ENST00000497382 NCAPD3P42695 1498 aa14.78□□□□□ -0.04
VIT-208ENST00000497382 KCNA4P22459 653 aa14.77□□□□□ -0.05
VIT-208ENST00000497382 PDIA4P13667 645 aaKnown RBP14.75□□□□□ -0.05
VIT-208ENST00000497382 TAOK2Q9UL54 1235 aa14.74□□□□□ -0.05
VIT-208ENST00000497382 ANP32EQ9BTT0 268 aa14.72□□□□□ -0.05
VIT-208ENST00000497382 PKNOX2Q96KN3 472 aa14.69□□□□□ -0.06
VIT-208ENST00000497382 HMGXB3Q12766 1538 aa14.67□□□□□ -0.06
VIT-208ENST00000497382 THOC2Q8NI27 1593 aaKnown RBP14.64□□□□□ -0.07
VIT-208ENST00000497382 ANO8Q9HCE9 1232 aaPredicted RBP14.63□□□□□ -0.07
VIT-208ENST00000497382 SMARCA2P51531 1590 aa14.62□□□□□ -0.07
VIT-208ENST00000497382 NPM2Q86SE8 214 aaKnown RBP14.62□□□□□ -0.07
VIT-208ENST00000497382 ATAD2BQ9ULI0 1458 aa14.61□□□□□ -0.07
VIT-208ENST00000497382 PDE4CQ08493 712 aa14.59□□□□□ -0.07
VIT-208ENST00000497382 LAMC3Q9Y6N6 1575 aa14.56□□□□□ -0.08
VIT-208ENST00000497382 TPRNQ4KMQ1 711 aa14.54□□□□□ -0.08
VIT-208ENST00000497382 NESP48681 1621 aa14.53□□□□□ -0.08
VIT-208ENST00000497382 TRIM41Q8WV44 630 aa14.51□□□□□ -0.09
VIT-208ENST00000497382 SMARCA4P51532 1647 aa14.5□□□□□ -0.09
VIT-208ENST00000497382 NEFLP07196 543 aa14.49□□□□□ -0.09
VIT-208ENST00000497382 C14orf37Q86TY3 774 aa14.49□□□□□ -0.09
VIT-208ENST00000497382 PPARGC1BQ86YN6 1023 aaKnown RBP14.49□□□□□ -0.09
VIT-208ENST00000497382 CSRNP3Q8WYN3 585 aa14.47□□□□□ -0.09
VIT-208ENST00000497382 ACIN1Q9UKV3 1341 aaKnown RBP14.47□□□□□ -0.09
VIT-208ENST00000497382 PEG3Q9GZU2 1588 aa14.45□□□□□ -0.1
VIT-208ENST00000497382 PDS5BQ9NTI5 1447 aa14.44□□□□□ -0.1
VIT-208ENST00000497382 LOC105371045A0A1W2PR82 267 aa14.44□□□□□ -0.1
VIT-208ENST00000497382 BAZ1BQ9UIG0 1483 aaKnown RBP14.44□□□□□ -0.1
VIT-208ENST00000497382 KIF21AQ7Z4S6 1674 aa14.43□□□□□ -0.1
VIT-208ENST00000497382 GTF3C3Q9Y5Q9 886 aa14.41□□□□□ -0.1
VIT-208ENST00000497382 BAZ1AQ9NRL2 1556 aaPredicted RBP14.39□□□□□ -0.11
VIT-208ENST00000497382 CHMP4AQ9BY43 222 aa14.37□□□□□ -0.11
VIT-208ENST00000497382 HAP1P54257 671 aaPredicted RBP14.35□□□□□ -0.11
VIT-208ENST00000497382 WDR62O43379 1518 aa14.35□□□□□ -0.11
VIT-208ENST00000497382 MRC2Q9UBG0 1479 aa14.35□□□□□ -0.11
VIT-208ENST00000497382 BCANQ96GW7 911 aa14.33□□□□□ -0.12
VIT-208ENST00000497382 BCL11BQ9C0K0 894 aaPredicted RBP14.33□□□□□ -0.12
VIT-208ENST00000497382 DHX37Q8IY37 1157 aaKnown RBP14.3□□□□□ -0.12
VIT-208ENST00000497382 TAF7LQ5H9L4 462 aa14.29□□□□□ -0.12
VIT-208ENST00000497382 CADPSQ9ULU8 1353 aa14.26□□□□□ -0.13
VIT-208ENST00000497382 FGD1P98174 961 aa14.25□□□□□ -0.13
VIT-208ENST00000497382 SAMD1Q6SPF0 538 aaPredicted RBP14.23□□□□□ -0.13
VIT-208ENST00000497382 OSCARQ8IYS5 282 aa14.23□□□□□ -0.13
VIT-208ENST00000497382 TRIM26Q12899 539 aaPredicted RBP14.2□□□□□ -0.14
VIT-208ENST00000497382 FBXO3Q9UK99 471 aa14.2□□□□□ -0.14
VIT-208ENST00000497382 NEUROD1Q13562 356 aa14.19□□□□□ -0.14
VIT-208ENST00000497382 BRD2P25440 801 aaKnown RBP14.17□□□□□ -0.14
VIT-208ENST00000497382 ERICH6BQ5W0A0 696 aa14.17□□□□□ -0.14
VIT-208ENST00000497382 CEP164Q9UPV0 1460 aa14.17□□□□□ -0.14
VIT-208ENST00000497382 CHIC1Q5VXU3 224 aa14.14□□□□□ -0.15
VIT-208ENST00000497382 RIMBP3CA6NJZ7 1639 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms