RNA–Protein interactions for RNA: ENST00000355648.8

PHACTR3-201, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,247 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-201ENST00000355648 CHIC1Q5VXU3 224 aa20.16■□□□□ 0.82
PHACTR3-201ENST00000355648 NISCHQ9Y2I1 1504 aa20.05■□□□□ 0.8
PHACTR3-201ENST00000355648 PELP1Q8IZL8 1130 aaKnown RBP19.55■□□□□ 0.72
PHACTR3-201ENST00000355648 MYT1Q01538 1121 aa19.25■□□□□ 0.67
PHACTR3-201ENST00000355648 SLC24A1O60721 1099 aa19.1■□□□□ 0.65
PHACTR3-201ENST00000355648 AEBP2Q6ZN18 517 aaPredicted RBP19.08■□□□□ 0.64
PHACTR3-201ENST00000355648 EHMT2Q96KQ7 1210 aa18.54■□□□□ 0.56
PHACTR3-201ENST00000355648 TTBK1Q5TCY1 1321 aaPredicted RBP18.47■□□□□ 0.55
PHACTR3-201ENST00000355648 HRCP23327 699 aa18.28■□□□□ 0.52
PHACTR3-201ENST00000355648 PHF23Q9BUL5 403 aaPredicted RBP18.18■□□□□ 0.5
PHACTR3-201ENST00000355648 PLPPR3Q6T4P5 718 aa17.83■□□□□ 0.44
PHACTR3-201ENST00000355648 SCAF1Q9H7N4 1312 aaKnown RBP17.76■□□□□ 0.43
PHACTR3-201ENST00000355648 RTN4Q9NQC3 1192 aaKnown RBP17.63■□□□□ 0.41
PHACTR3-201ENST00000355648 PRKCSHP14314 528 aaPredicted RBP17.59■□□□□ 0.41
PHACTR3-201ENST00000355648 PPARGC1BQ86YN6 1023 aaKnown RBP17.53■□□□□ 0.4
PHACTR3-201ENST00000355648 ERICH6Q7L0X2 663 aa17.49■□□□□ 0.39
PHACTR3-201ENST00000355648 CSRNP3Q8WYN3 585 aa17.42■□□□□ 0.38
PHACTR3-201ENST00000355648 BCL11AQ9H165 835 aa17.41■□□□□ 0.38
PHACTR3-201ENST00000355648 CCDC180Q9P1Z9 1646 aa17.4■□□□□ 0.38
PHACTR3-201ENST00000355648 KCNA4P22459 653 aa17.34■□□□□ 0.37
PHACTR3-201ENST00000355648 APLP2Q06481 763 aa17.32■□□□□ 0.36
PHACTR3-201ENST00000355648 AMER1Q5JTC6 1135 aaPredicted RBP17.24■□□□□ 0.35
PHACTR3-201ENST00000355648 CENPBP07199 599 aaPredicted RBP17.21■□□□□ 0.35
PHACTR3-201ENST00000355648 PCGF6Q9BYE7 350 aa17.19■□□□□ 0.34
PHACTR3-201ENST00000355648 FAM9AQ8IZU1 332 aaPredicted RBP17.15■□□□□ 0.34
PHACTR3-201ENST00000355648 ACIN1Q9UKV3 1341 aaKnown RBP17.12■□□□□ 0.33
PHACTR3-201ENST00000355648 NCBP3Q53F19 620 aaKnown RBP17.06■□□□□ 0.32
PHACTR3-201ENST00000355648 ZEB1P37275 1124 aaPredicted RBP17.01■□□□□ 0.31
PHACTR3-201ENST00000355648 GTF3C3Q9Y5Q9 886 aa16.93■□□□□ 0.3
PHACTR3-201ENST00000355648 DAXXQ9UER7 740 aaPredicted RBP16.89■□□□□ 0.29
PHACTR3-201ENST00000355648 NEUROD1Q13562 356 aa16.88■□□□□ 0.29
PHACTR3-201ENST00000355648 ZCCHC6Q5VYS8 1495 aaKnown RBP16.83■□□□□ 0.29
PHACTR3-201ENST00000355648 ANP32EQ9BTT0 268 aa16.79■□□□□ 0.28
PHACTR3-201ENST00000355648 MYO15BQ96JP2 1530 aa16.67■□□□□ 0.26
PHACTR3-201ENST00000355648 DCAF8L2P0C7V8 631 aa16.66■□□□□ 0.26
PHACTR3-201ENST00000355648 SLC4A1APQ9BWU0 796 aaKnown RBP16.66■□□□□ 0.26
PHACTR3-201ENST00000355648 DCAF1Q9Y4B6 1507 aa16.66■□□□□ 0.26
PHACTR3-201ENST00000355648 TRIM26Q12899 539 aaPredicted RBP16.58■□□□□ 0.25
PHACTR3-201ENST00000355648 ABCC9O60706 1549 aa16.51■□□□□ 0.23
PHACTR3-201ENST00000355648 SHROOM4Q9ULL8 1493 aa16.46■□□□□ 0.22
PHACTR3-201ENST00000355648 ADRA2BP18089 450 aa16.33■□□□□ 0.2
PHACTR3-201ENST00000355648 EIF5BO60841 1220 aaKnown RBP16.26■□□□□ 0.19
PHACTR3-201ENST00000355648 NACADO15069 1562 aa16.23■□□□□ 0.19
PHACTR3-201ENST00000355648 UBE2Q2Q8WVN8 375 aa16.23■□□□□ 0.19
PHACTR3-201ENST00000355648 CLSPNQ9HAW4 1339 aa16.22■□□□□ 0.19
PHACTR3-201ENST00000355648 DIEXFQ68CQ4 756 aaKnown RBP16.21■□□□□ 0.19
PHACTR3-201ENST00000355648 TIMELESSQ9UNS1 1208 aa16.19■□□□□ 0.18
PHACTR3-201ENST00000355648 TAOK2Q9UL54 1235 aa16.18■□□□□ 0.18
PHACTR3-201ENST00000355648 ARXQ96QS3 562 aa16.15■□□□□ 0.18
PHACTR3-201ENST00000355648 TSHZ2Q9NRE2 1034 aa16.13■□□□□ 0.17
PHACTR3-201ENST00000355648 ZBTB22O15209 634 aa16.12■□□□□ 0.17
PHACTR3-201ENST00000355648 ANO8Q9HCE9 1232 aaPredicted RBP16.11■□□□□ 0.17
PHACTR3-201ENST00000355648 RB1CC1Q8TDY2 1594 aa16.08■□□□□ 0.17
PHACTR3-201ENST00000355648 SCRIBQ14160 1630 aa16.07■□□□□ 0.16
PHACTR3-201ENST00000355648 MYT1LQ9UL68 1186 aa16.04■□□□□ 0.16
PHACTR3-201ENST00000355648 BCANQ96GW7 911 aa16■□□□□ 0.15
PHACTR3-201ENST00000355648 ERICH6BQ5W0A0 696 aa15.98■□□□□ 0.15
PHACTR3-201ENST00000355648 TULP1O00294 542 aaPredicted RBP15.94■□□□□ 0.14
PHACTR3-201ENST00000355648 SUPT16HQ9Y5B9 1047 aaKnown RBP15.91■□□□□ 0.14
PHACTR3-201ENST00000355648 PLCB2Q00722 1185 aa15.91■□□□□ 0.14
PHACTR3-201ENST00000355648 TPRNQ4KMQ1 711 aa15.9■□□□□ 0.14
PHACTR3-201ENST00000355648 SUPT5HO00267 1087 aaKnown RBP15.88■□□□□ 0.13
PHACTR3-201ENST00000355648 TRIM41Q8WV44 630 aa15.88■□□□□ 0.13
PHACTR3-201ENST00000355648 YTHDC1Q96MU7 727 aaKnown RBP15.85■□□□□ 0.13
PHACTR3-201ENST00000355648 SALL2Q9Y467 1007 aaPredicted RBP15.8■□□□□ 0.12
PHACTR3-201ENST00000355648 UNC13AQ9UPW8 1703 aa15.79■□□□□ 0.12
PHACTR3-201ENST00000355648 PKNOX2Q96KN3 472 aa15.78■□□□□ 0.12
PHACTR3-201ENST00000355648 LOC105371045A0A1W2PR82 267 aa15.73■□□□□ 0.11
PHACTR3-201ENST00000355648 PLEKHG5O94827 1062 aa15.7■□□□□ 0.1
PHACTR3-201ENST00000355648 HAP1P54257 671 aaPredicted RBP15.7■□□□□ 0.1
PHACTR3-201ENST00000355648 ZNF316A6NFI3 1004 aaPredicted RBP15.7■□□□□ 0.1
PHACTR3-201ENST00000355648 PODXL2Q9NZ53 605 aa15.7■□□□□ 0.1
PHACTR3-201ENST00000355648 DEKP35659 375 aaKnown RBP15.68■□□□□ 0.1
PHACTR3-201ENST00000355648 HOMEZQ8IX15 550 aa15.66■□□□□ 0.1
PHACTR3-201ENST00000355648 RBM19Q9Y4C8 960 aaKnown RBP15.66■□□□□ 0.1
PHACTR3-201ENST00000355648 CCER1Q8TC90 406 aaPredicted RBP15.66■□□□□ 0.1
PHACTR3-201ENST00000355648 PABPN1Q86U42 306 aaKnown RBP eCLIP15.64■□□□□ 0.09
PHACTR3-201ENST00000355648 CCDC136Q96JN2 1154 aa15.63■□□□□ 0.09
PHACTR3-201ENST00000355648 BICRAQ9NZM4 1560 aa15.63■□□□□ 0.09
PHACTR3-201ENST00000355648 CECR2Q9BXF3 1484 aa15.62■□□□□ 0.09
PHACTR3-201ENST00000355648 MIER1Q8N108 512 aa15.6■□□□□ 0.09
PHACTR3-201ENST00000355648 RSF1Q96T23 1441 aaPredicted RBP15.6■□□□□ 0.09
PHACTR3-201ENST00000355648 NPM3O75607 178 aaKnown RBP15.58■□□□□ 0.08
PHACTR3-201ENST00000355648 FKBP8Q14318 412 aa15.56■□□□□ 0.08
PHACTR3-201ENST00000355648 FANCIQ9NVI1 1328 aa15.56■□□□□ 0.08
PHACTR3-201ENST00000355648 MSH5O43196 834 aa15.55■□□□□ 0.08
PHACTR3-201ENST00000355648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.52■□□□□ 0.08
PHACTR3-201ENST00000355648 MROH2BQ7Z745 1585 aa15.51■□□□□ 0.07
PHACTR3-201ENST00000355648 SENP3Q9H4L4 574 aaPredicted RBP15.51■□□□□ 0.07
PHACTR3-201ENST00000355648 PPP6R1Q9UPN7 881 aa15.49■□□□□ 0.07
PHACTR3-201ENST00000355648 BAZ1AQ9NRL2 1556 aaPredicted RBP15.46■□□□□ 0.07
PHACTR3-201ENST00000355648 RANGAP1P46060 587 aaPredicted RBP15.45■□□□□ 0.06
PHACTR3-201ENST00000355648 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.41■□□□□ 0.06
PHACTR3-201ENST00000355648 NEFLP07196 543 aa15.4■□□□□ 0.06
PHACTR3-201ENST00000355648 PPP4R3CPQ6ZMV5 832 aa15.4■□□□□ 0.06
PHACTR3-201ENST00000355648 SMARCA4P51532 1647 aa15.39■□□□□ 0.05
PHACTR3-201ENST00000355648 WIZO95785 1651 aa15.39■□□□□ 0.05
PHACTR3-201ENST00000355648 GLIPR1L2Q4G1C9 344 aa15.37■□□□□ 0.05
PHACTR3-201ENST00000355648 VSIG10Q8N0Z9 540 aa15.36■□□□□ 0.05
PHACTR3-201ENST00000355648 IL27Q8NEV9 243 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms