Protein–RNA interactions for Protein: Q8ND04

SMG8, Protein SMG8, humanhuman

Known RBP Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8Q8ND04 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMG8Q8ND04 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.04■□□□□ 0.64
SMG8Q8ND04 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMG8Q8ND04 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SMG8Q8ND04 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SMG8Q8ND04 ABALON-201ENST00000629058 1903 ntBASIC19.04■□□□□ 0.64
SMG8Q8ND04 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.04■□□□□ 0.64
SMG8Q8ND04 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMG8Q8ND04 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.03■□□□□ 0.64
SMG8Q8ND04 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMG8Q8ND04 PMS2P7-201ENST00000506558 1336 ntBASIC19.03■□□□□ 0.64
SMG8Q8ND04 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SMG8Q8ND04 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SMG8Q8ND04 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.03■□□□□ 0.64
SMG8Q8ND04 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMG8Q8ND04 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMG8Q8ND04 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.03■□□□□ 0.64
SMG8Q8ND04 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMG8Q8ND04 AC009947.1-201ENST00000444350 727 ntBASIC19.03■□□□□ 0.64
SMG8Q8ND04 PGAM5P1-201ENST00000518923 814 ntBASIC19.03■□□□□ 0.64
SMG8Q8ND04 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.03■□□□□ 0.64
SMG8Q8ND04 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMG8Q8ND04 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMG8Q8ND04 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SMG8Q8ND04 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.03■□□□□ 0.64
SMG8Q8ND04 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.03■□□□□ 0.64
SMG8Q8ND04 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SMG8Q8ND04 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMG8Q8ND04 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.02■□□□□ 0.64
SMG8Q8ND04 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMG8Q8ND04 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.02■□□□□ 0.64
SMG8Q8ND04 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.02■□□□□ 0.64
SMG8Q8ND04 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.02■□□□□ 0.64
SMG8Q8ND04 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMG8Q8ND04 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMG8Q8ND04 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMG8Q8ND04 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.02■□□□□ 0.64
SMG8Q8ND04 SIGLEC30P-201ENST00000455569 941 ntBASIC19.02■□□□□ 0.64
SMG8Q8ND04 AC002558.1-201ENST00000488906 803 ntBASIC19.02■□□□□ 0.64
SMG8Q8ND04 STK19B-204ENST00000512515 211 ntBASIC19.02■□□□□ 0.64
SMG8Q8ND04 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.02■□□□□ 0.64
SMG8Q8ND04 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.02■□□□□ 0.64
SMG8Q8ND04 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SMG8Q8ND04 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
SMG8Q8ND04 AC027601.4-201ENST00000611259 610 ntBASIC19.02■□□□□ 0.64
SMG8Q8ND04 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMG8Q8ND04 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SMG8Q8ND04 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMG8Q8ND04 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SMG8Q8ND04 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SMG8Q8ND04 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.02■□□□□ 0.63
SMG8Q8ND04 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.02■□□□□ 0.63
SMG8Q8ND04 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.02■□□□□ 0.63
SMG8Q8ND04 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.02■□□□□ 0.63
SMG8Q8ND04 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMG8Q8ND04 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMG8Q8ND04 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.01■□□□□ 0.63
SMG8Q8ND04 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.01■□□□□ 0.63
SMG8Q8ND04 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SMG8Q8ND04 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMG8Q8ND04 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SMG8Q8ND04 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SMG8Q8ND04 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMG8Q8ND04 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMG8Q8ND04 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMG8Q8ND04 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.01■□□□□ 0.63
SMG8Q8ND04 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.01■□□□□ 0.63
SMG8Q8ND04 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMG8Q8ND04 IGHV3-52-201ENST00000519770 353 ntBASIC19.01■□□□□ 0.63
SMG8Q8ND04 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMG8Q8ND04 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.01■□□□□ 0.63
SMG8Q8ND04 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.01■□□□□ 0.63
SMG8Q8ND04 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.01■□□□□ 0.63
SMG8Q8ND04 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMG8Q8ND04 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMG8Q8ND04 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMG8Q8ND04 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMG8Q8ND04 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMG8Q8ND04 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMG8Q8ND04 AC006504.4-201ENST00000592118 1568 ntBASIC19.01■□□□□ 0.63
SMG8Q8ND04 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMG8Q8ND04 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.01■□□□□ 0.63
SMG8Q8ND04 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SMG8Q8ND04 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
SMG8Q8ND04 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19■□□□□ 0.63
SMG8Q8ND04 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMG8Q8ND04 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMG8Q8ND04 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SMG8Q8ND04 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19■□□□□ 0.63
SMG8Q8ND04 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SMG8Q8ND04 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMG8Q8ND04 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19■□□□□ 0.63
SMG8Q8ND04 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMG8Q8ND04 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SMG8Q8ND04 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19■□□□□ 0.63
SMG8Q8ND04 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19■□□□□ 0.63
SMG8Q8ND04 MED15P5-201ENST00000423150 992 ntBASIC19■□□□□ 0.63
SMG8Q8ND04 AC005104.2-201ENST00000427818 678 ntBASIC19■□□□□ 0.63
SMG8Q8ND04 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19■□□□□ 0.63
SMG8Q8ND04 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms