Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CROCCP3Q8IVE0 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 GMCL1P1-201ENST00000463439 1581 ntBASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 AC126177.1-201ENST00000547829 2218 ntBASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CROCCP3Q8IVE0 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CROCCP3Q8IVE0 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CROCCP3Q8IVE0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CROCCP3Q8IVE0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CROCCP3Q8IVE0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.08■□□□□ 0.17
CROCCP3Q8IVE0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CROCCP3Q8IVE0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CROCCP3Q8IVE0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
CROCCP3Q8IVE0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CROCCP3Q8IVE0 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CROCCP3Q8IVE0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
CROCCP3Q8IVE0 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 PAUPAR-201ENST00000630360 2965 ntBASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.08■□□□□ 0.16
CROCCP3Q8IVE0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CROCCP3Q8IVE0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms