Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC22.09■■□□□ 1.13
COL23A1Q86Y22 PHGDH-209ENST00000641074 1780 ntBASIC22.09■■□□□ 1.13
COL23A1Q86Y22 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL23A1Q86Y22 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
COL23A1Q86Y22 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
COL23A1Q86Y22 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.09■■□□□ 1.13
COL23A1Q86Y22 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL23A1Q86Y22 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
COL23A1Q86Y22 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL23A1Q86Y22 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC22.08■■□□□ 1.13
COL23A1Q86Y22 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL23A1Q86Y22 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL23A1Q86Y22 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
COL23A1Q86Y22 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC22.08■■□□□ 1.13
COL23A1Q86Y22 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC22.08■■□□□ 1.13
COL23A1Q86Y22 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
COL23A1Q86Y22 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
COL23A1Q86Y22 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC22.08■■□□□ 1.13
COL23A1Q86Y22 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
COL23A1Q86Y22 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
COL23A1Q86Y22 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
COL23A1Q86Y22 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
COL23A1Q86Y22 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
COL23A1Q86Y22 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.08■■□□□ 1.12
COL23A1Q86Y22 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
COL23A1Q86Y22 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL23A1Q86Y22 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC22.07■■□□□ 1.12
COL23A1Q86Y22 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL23A1Q86Y22 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
COL23A1Q86Y22 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL23A1Q86Y22 AC002056.1-201ENST00000395613 760 ntBASIC22.07■■□□□ 1.12
COL23A1Q86Y22 GPS2P2-201ENST00000430745 888 ntBASIC22.07■■□□□ 1.12
COL23A1Q86Y22 AL592309.1-201ENST00000443127 649 ntBASIC22.07■■□□□ 1.12
COL23A1Q86Y22 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC22.07■■□□□ 1.12
COL23A1Q86Y22 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL23A1Q86Y22 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL23A1Q86Y22 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC22.07■■□□□ 1.12
COL23A1Q86Y22 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL23A1Q86Y22 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
COL23A1Q86Y22 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC22.07■■□□□ 1.12
COL23A1Q86Y22 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 PC-208ENST00000529047 1607 ntTSL 3 BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 FAM207CP-201ENST00000443486 507 ntBASIC22.06■■□□□ 1.12
COL23A1Q86Y22 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 SPDYE11-202ENST00000450699 704 ntBASIC22.06■■□□□ 1.12
COL23A1Q86Y22 KLF2P3-201ENST00000451977 1087 ntBASIC22.06■■□□□ 1.12
COL23A1Q86Y22 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 SPDYE9P-201ENST00000570642 692 ntBASIC22.06■■□□□ 1.12
COL23A1Q86Y22 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 SPDYE10P-202ENST00000612005 668 ntBASIC22.06■■□□□ 1.12
COL23A1Q86Y22 SPDYE8P-202ENST00000612377 668 ntBASIC22.06■■□□□ 1.12
COL23A1Q86Y22 AP001059.3-201ENST00000619053 235 ntBASIC22.06■■□□□ 1.12
COL23A1Q86Y22 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 ANO7L1-203ENST00000602586 1720 ntBASIC22.06■■□□□ 1.12
COL23A1Q86Y22 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
COL23A1Q86Y22 AL590787.1-201ENST00000568856 1315 ntBASIC22.06■■□□□ 1.12
COL23A1Q86Y22 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 FO538757.1-201ENST00000623083 1397 ntBASIC22.05■■□□□ 1.12
COL23A1Q86Y22 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 HLA-V-201ENST00000429037 534 ntBASIC22.05■■□□□ 1.12
COL23A1Q86Y22 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 AC079140.1-201ENST00000508039 487 ntBASIC22.05■■□□□ 1.12
COL23A1Q86Y22 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 RPL28-209ENST00000560055 670 ntTSL 3 BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 SP100-208ENST00000427101 1922 ntTSL 2 BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 AC100803.2-201ENST00000562459 1963 ntBASIC22.05■■□□□ 1.12
COL23A1Q86Y22 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
COL23A1Q86Y22 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms