Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 LINC00602-201ENST00000629776 2065 ntBASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 AC246785.2-201ENST00000432512 513 ntBASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 IGHV3-41-201ENST00000613121 348 ntBASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 AL162727.3-201ENST00000635661 2787 ntBASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NIPAL1Q6NVV3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 UPK3BP1-201ENST00000428678 509 ntBASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 ATP5G2P1-201ENST00000433580 426 ntBASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 AC012317.2-201ENST00000623305 2251 ntBASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 AC016734.2-201ENST00000624325 1377 ntBASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NIPAL1Q6NVV3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 AC080080.1-201ENST00000625121 2420 ntBASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
NIPAL1Q6NVV3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms