Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF43Q68DV7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF43Q68DV7 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF43Q68DV7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.6■□□□□ 0.57
RNF43Q68DV7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF43Q68DV7 AC009154.2-201ENST00000621177 724 ntBASIC18.6■□□□□ 0.57
RNF43Q68DV7 AL645608.8-201ENST00000606034 2086 ntBASIC18.6■□□□□ 0.57
RNF43Q68DV7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF43Q68DV7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF43Q68DV7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
RNF43Q68DV7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF43Q68DV7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RNF43Q68DV7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF43Q68DV7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF43Q68DV7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
RNF43Q68DV7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF43Q68DV7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RNF43Q68DV7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.59■□□□□ 0.57
RNF43Q68DV7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.59■□□□□ 0.57
RNF43Q68DV7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RNF43Q68DV7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.59■□□□□ 0.57
RNF43Q68DV7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RNF43Q68DV7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
RNF43Q68DV7 AC099343.3-201ENST00000605834 2503 ntBASIC18.59■□□□□ 0.57
RNF43Q68DV7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 AC135776.1-201ENST00000319817 2481 ntBASIC18.59■□□□□ 0.57
RNF43Q68DV7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RNF43Q68DV7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RNF43Q68DV7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF43Q68DV7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.58■□□□□ 0.57
RNF43Q68DV7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF43Q68DV7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF43Q68DV7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
RNF43Q68DV7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF43Q68DV7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RNF43Q68DV7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
RNF43Q68DV7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF43Q68DV7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF43Q68DV7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
RNF43Q68DV7 KRT18P13-201ENST00000400056 1290 ntBASIC18.58■□□□□ 0.56
RNF43Q68DV7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RNF43Q68DV7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
RNF43Q68DV7 AC068472.1-201ENST00000474589 881 ntBASIC18.58■□□□□ 0.56
RNF43Q68DV7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.58■□□□□ 0.56
RNF43Q68DV7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF43Q68DV7 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.58■□□□□ 0.56
RNF43Q68DV7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.58■□□□□ 0.56
RNF43Q68DV7 Z69720.1-201ENST00000601483 472 ntBASIC18.58■□□□□ 0.56
RNF43Q68DV7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF43Q68DV7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF43Q68DV7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF43Q68DV7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF43Q68DV7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF43Q68DV7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.58■□□□□ 0.56
RNF43Q68DV7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF43Q68DV7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF43Q68DV7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.58■□□□□ 0.56
RNF43Q68DV7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RNF43Q68DV7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF43Q68DV7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RNF43Q68DV7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF43Q68DV7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF43Q68DV7 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RNF43Q68DV7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF43Q68DV7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF43Q68DV7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RNF43Q68DV7 AC106820.2-201ENST00000563775 3264 ntBASIC18.57■□□□□ 0.56
RNF43Q68DV7 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF43Q68DV7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF43Q68DV7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RNF43Q68DV7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF43Q68DV7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF43Q68DV7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF43Q68DV7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF43Q68DV7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF43Q68DV7 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.57■□□□□ 0.56
RNF43Q68DV7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.57■□□□□ 0.56
RNF43Q68DV7 AL121912.1-201ENST00000603683 238 ntBASIC18.57■□□□□ 0.56
RNF43Q68DV7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RNF43Q68DV7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF43Q68DV7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.57■□□□□ 0.56
RNF43Q68DV7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms