Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 SOX15-203ENST00000570788 1093 ntBASIC16.74■□□□□ 0.27
LPCAT4Q643R3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 AC080038.1-201ENST00000611274 1154 ntBASIC16.74■□□□□ 0.27
LPCAT4Q643R3 AL050303.2-201ENST00000619798 666 ntBASIC16.74■□□□□ 0.27
LPCAT4Q643R3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 AC073111.5-205ENST00000641717 521 ntBASIC16.74■□□□□ 0.27
LPCAT4Q643R3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LPCAT4Q643R3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 AC105917.1-201ENST00000506637 2539 ntBASIC16.73■□□□□ 0.27
LPCAT4Q643R3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.73■□□□□ 0.27
LPCAT4Q643R3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 AC004264.1-201ENST00000608354 794 ntBASIC16.72■□□□□ 0.27
LPCAT4Q643R3 IKBKGP1-201ENST00000612193 1073 ntBASIC16.72■□□□□ 0.27
LPCAT4Q643R3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 AC022188.1-201ENST00000620960 1664 ntBASIC16.72■□□□□ 0.27
LPCAT4Q643R3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LPCAT4Q643R3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 CYP2T1P-202ENST00000641596 2535 ntBASIC16.71■□□□□ 0.27
LPCAT4Q643R3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.71■□□□□ 0.27
LPCAT4Q643R3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
LPCAT4Q643R3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms