Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 HTR5BP-201ENST00000430851 1154 ntBASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 KRT18P2-201ENST00000447938 1258 ntBASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 SDHAP2-201ENST00000455183 2001 ntBASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.93■□□□□ 0.62
CTC1Q2NKJ3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 AC254562.1-201ENST00000417586 456 ntBASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 PGM5P2-202ENST00000637225 1043 ntBASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CTC1Q2NKJ3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 AC073621.1-201ENST00000392730 636 ntBASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 SNHG9-202ENST00000564014 471 ntBASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.91■□□□□ 0.62
CTC1Q2NKJ3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms