Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
UBA52P62987 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA52P62987 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
UBA52P62987 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA52P62987 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
UBA52P62987 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA52P62987 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
UBA52P62987 AL450487.1-201ENST00000426799 995 ntBASIC15.34■□□□□ 0.05
UBA52P62987 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.34■□□□□ 0.05
UBA52P62987 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.34■□□□□ 0.05
UBA52P62987 KRT18P38-201ENST00000449496 1282 ntBASIC15.34■□□□□ 0.05
UBA52P62987 VENTXP5-201ENST00000523979 775 ntBASIC15.34■□□□□ 0.05
UBA52P62987 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.34■□□□□ 0.05
UBA52P62987 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.34■□□□□ 0.05
UBA52P62987 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.34■□□□□ 0.05
UBA52P62987 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
UBA52P62987 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.34■□□□□ 0.05
UBA52P62987 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.34■□□□□ 0.05
UBA52P62987 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
UBA52P62987 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UBA52P62987 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA52P62987 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.34■□□□□ 0.05
UBA52P62987 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
UBA52P62987 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
UBA52P62987 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA52P62987 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA52P62987 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA52P62987 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA52P62987 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBA52P62987 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBA52P62987 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.33■□□□□ 0.05
UBA52P62987 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBA52P62987 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.33■□□□□ 0.05
UBA52P62987 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
UBA52P62987 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.33■□□□□ 0.05
UBA52P62987 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.33■□□□□ 0.05
UBA52P62987 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.33■□□□□ 0.05
UBA52P62987 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBA52P62987 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.33■□□□□ 0.05
UBA52P62987 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
UBA52P62987 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBA52P62987 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBA52P62987 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.33■□□□□ 0.05
UBA52P62987 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBA52P62987 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.33■□□□□ 0.05
UBA52P62987 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
UBA52P62987 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBA52P62987 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
UBA52P62987 AL513477.1-201ENST00000602865 2407 ntBASIC15.33■□□□□ 0.04
UBA52P62987 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
UBA52P62987 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBA52P62987 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBA52P62987 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.33■□□□□ 0.04
UBA52P62987 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.33■□□□□ 0.04
UBA52P62987 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBA52P62987 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.33■□□□□ 0.04
UBA52P62987 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBA52P62987 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBA52P62987 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.33■□□□□ 0.04
UBA52P62987 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBA52P62987 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.33■□□□□ 0.04
UBA52P62987 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC15.33■□□□□ 0.04
UBA52P62987 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.33■□□□□ 0.04
UBA52P62987 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBA52P62987 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.33■□□□□ 0.04
UBA52P62987 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.33■□□□□ 0.04
UBA52P62987 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBA52P62987 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
UBA52P62987 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
UBA52P62987 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
UBA52P62987 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.33■□□□□ 0.04
UBA52P62987 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBA52P62987 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBA52P62987 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.33■□□□□ 0.04
UBA52P62987 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
UBA52P62987 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.33■□□□□ 0.04
UBA52P62987 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBA52P62987 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBA52P62987 SDHAP1-207ENST00000440850 2000 ntBASIC15.33■□□□□ 0.04
UBA52P62987 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.32■□□□□ 0.04
UBA52P62987 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
UBA52P62987 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
UBA52P62987 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
UBA52P62987 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.32■□□□□ 0.04
UBA52P62987 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.32■□□□□ 0.04
UBA52P62987 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBA52P62987 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.32■□□□□ 0.04
UBA52P62987 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.32■□□□□ 0.04
UBA52P62987 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms