Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
CPT1AP50416 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CPT1AP50416 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.55■□□□□ 0.72
CPT1AP50416 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CPT1AP50416 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CPT1AP50416 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPT1AP50416 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPT1AP50416 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPT1AP50416 MYCLP1-201ENST00000372451 1075 ntBASIC19.55■□□□□ 0.72
CPT1AP50416 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPT1AP50416 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPT1AP50416 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.55■□□□□ 0.72
CPT1AP50416 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.55■□□□□ 0.72
CPT1AP50416 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.55■□□□□ 0.72
CPT1AP50416 HMGN1P19-201ENST00000436976 333 ntBASIC19.55■□□□□ 0.72
CPT1AP50416 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.55■□□□□ 0.72
CPT1AP50416 ALG1L5P-201ENST00000482043 771 ntBASIC19.55■□□□□ 0.72
CPT1AP50416 AC002558.1-201ENST00000488906 803 ntBASIC19.55■□□□□ 0.72
CPT1AP50416 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.55■□□□□ 0.72
CPT1AP50416 SNHG9-202ENST00000564014 471 ntBASIC19.55■□□□□ 0.72
CPT1AP50416 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.55■□□□□ 0.72
CPT1AP50416 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.55■□□□□ 0.72
CPT1AP50416 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.55■□□□□ 0.72
CPT1AP50416 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.55■□□□□ 0.72
CPT1AP50416 GGTLC5P-201ENST00000617623 998 ntBASIC19.55■□□□□ 0.72
CPT1AP50416 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
CPT1AP50416 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
CPT1AP50416 WIZP1-201ENST00000531444 2299 ntBASIC19.55■□□□□ 0.72
CPT1AP50416 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPT1AP50416 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.55■□□□□ 0.72
CPT1AP50416 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPT1AP50416 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CPT1AP50416 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPT1AP50416 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CPT1AP50416 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CPT1AP50416 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CPT1AP50416 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.54■□□□□ 0.72
CPT1AP50416 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPT1AP50416 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPT1AP50416 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CPT1AP50416 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CPT1AP50416 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPT1AP50416 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CPT1AP50416 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPT1AP50416 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPT1AP50416 AP002414.1-201ENST00000391405 1147 ntBASIC19.54■□□□□ 0.72
CPT1AP50416 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
CPT1AP50416 MKNK2P1-201ENST00000437526 628 ntBASIC19.54■□□□□ 0.72
CPT1AP50416 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.54■□□□□ 0.72
CPT1AP50416 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.54■□□□□ 0.72
CPT1AP50416 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.54■□□□□ 0.72
CPT1AP50416 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
CPT1AP50416 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.54■□□□□ 0.72
CPT1AP50416 AL513190.1-201ENST00000621254 727 ntBASIC19.54■□□□□ 0.72
CPT1AP50416 AC135776.1-201ENST00000319817 2481 ntBASIC19.54■□□□□ 0.72
CPT1AP50416 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPT1AP50416 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.54■□□□□ 0.72
CPT1AP50416 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.54■□□□□ 0.72
CPT1AP50416 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPT1AP50416 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CPT1AP50416 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CPT1AP50416 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPT1AP50416 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CPT1AP50416 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
CPT1AP50416 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPT1AP50416 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPT1AP50416 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.53■□□□□ 0.72
CPT1AP50416 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.53■□□□□ 0.72
CPT1AP50416 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CPT1AP50416 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPT1AP50416 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPT1AP50416 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CPT1AP50416 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CPT1AP50416 PTCHD3P3-201ENST00000403073 906 ntBASIC19.53■□□□□ 0.72
CPT1AP50416 AC254562.1-201ENST00000417586 456 ntBASIC19.53■□□□□ 0.72
CPT1AP50416 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.53■□□□□ 0.72
CPT1AP50416 HTR5BP-201ENST00000430851 1154 ntBASIC19.53■□□□□ 0.72
CPT1AP50416 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.53■□□□□ 0.72
CPT1AP50416 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.53■□□□□ 0.72
CPT1AP50416 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.53■□□□□ 0.72
CPT1AP50416 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.53■□□□□ 0.72
CPT1AP50416 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.53■□□□□ 0.72
CPT1AP50416 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.53■□□□□ 0.72
CPT1AP50416 AL353135.1-201ENST00000606729 504 ntBASIC19.53■□□□□ 0.72
CPT1AP50416 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.53■□□□□ 0.72
CPT1AP50416 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CPT1AP50416 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.53■□□□□ 0.72
CPT1AP50416 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPT1AP50416 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPT1AP50416 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPT1AP50416 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CPT1AP50416 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CPT1AP50416 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CPT1AP50416 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.53■□□□□ 0.72
CPT1AP50416 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CPT1AP50416 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.53■□□□□ 0.72
CPT1AP50416 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.52■□□□□ 0.72
CPT1AP50416 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CPT1AP50416 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CPT1AP50416 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms