Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
GRIK1P39086 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.68■□□□□ 0.58
GRIK1P39086 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.68■□□□□ 0.58
GRIK1P39086 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 AC103564.2-201ENST00000432853 1299 ntBASIC18.68■□□□□ 0.58
GRIK1P39086 AF186996.4-201ENST00000467186 377 ntBASIC18.68■□□□□ 0.58
GRIK1P39086 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.68■□□□□ 0.58
GRIK1P39086 AC079776.4-201ENST00000511039 504 ntBASIC18.68■□□□□ 0.58
GRIK1P39086 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.68■□□□□ 0.58
GRIK1P39086 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.68■□□□□ 0.58
GRIK1P39086 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.68■□□□□ 0.58
GRIK1P39086 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.68■□□□□ 0.58
GRIK1P39086 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.68■□□□□ 0.58
GRIK1P39086 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.68■□□□□ 0.58
GRIK1P39086 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
GRIK1P39086 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GRIK1P39086 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.68■□□□□ 0.58
GRIK1P39086 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GRIK1P39086 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GRIK1P39086 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.67■□□□□ 0.58
GRIK1P39086 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GRIK1P39086 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GRIK1P39086 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GRIK1P39086 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GRIK1P39086 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GRIK1P39086 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
GRIK1P39086 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
GRIK1P39086 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.67■□□□□ 0.58
GRIK1P39086 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GRIK1P39086 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GRIK1P39086 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GRIK1P39086 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GRIK1P39086 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GRIK1P39086 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GRIK1P39086 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GRIK1P39086 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GRIK1P39086 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GRIK1P39086 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.67■□□□□ 0.58
GRIK1P39086 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.67■□□□□ 0.58
GRIK1P39086 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.67■□□□□ 0.58
GRIK1P39086 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.67■□□□□ 0.58
GRIK1P39086 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.67■□□□□ 0.58
GRIK1P39086 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
GRIK1P39086 KRT18P55-202ENST00000578578 1546 ntBASIC18.67■□□□□ 0.58
GRIK1P39086 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GRIK1P39086 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.67■□□□□ 0.58
GRIK1P39086 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GRIK1P39086 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GRIK1P39086 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.67■□□□□ 0.58
GRIK1P39086 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GRIK1P39086 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GRIK1P39086 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GRIK1P39086 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GRIK1P39086 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GRIK1P39086 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GRIK1P39086 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GRIK1P39086 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GRIK1P39086 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GRIK1P39086 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GRIK1P39086 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.66■□□□□ 0.58
GRIK1P39086 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GRIK1P39086 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GRIK1P39086 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GRIK1P39086 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GRIK1P39086 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
GRIK1P39086 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
GRIK1P39086 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GRIK1P39086 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GRIK1P39086 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GRIK1P39086 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.66■□□□□ 0.58
GRIK1P39086 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GRIK1P39086 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
GRIK1P39086 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
GRIK1P39086 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.66■□□□□ 0.58
GRIK1P39086 AC073648.2-201ENST00000510116 352 ntBASIC18.66■□□□□ 0.58
GRIK1P39086 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.66■□□□□ 0.58
GRIK1P39086 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.66■□□□□ 0.58
GRIK1P39086 AP000867.4-201ENST00000641616 219 ntBASIC18.66■□□□□ 0.58
GRIK1P39086 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
GRIK1P39086 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GRIK1P39086 AL356309.3-201ENST00000624132 1934 ntBASIC18.66■□□□□ 0.58
GRIK1P39086 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.66■□□□□ 0.58
GRIK1P39086 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
GRIK1P39086 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GRIK1P39086 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GRIK1P39086 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
GRIK1P39086 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIK1P39086 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIK1P39086 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GRIK1P39086 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms