Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TOP1P11387 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TOP1P11387 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TOP1P11387 SAPCD2P3-201ENST00000455031 850 ntBASIC20.83■□□□□ 0.93
TOP1P11387 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TOP1P11387 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.83■□□□□ 0.93
TOP1P11387 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
TOP1P11387 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.83■□□□□ 0.93
TOP1P11387 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TOP1P11387 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.83■□□□□ 0.93
TOP1P11387 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.83■□□□□ 0.93
TOP1P11387 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.83■□□□□ 0.93
TOP1P11387 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TOP1P11387 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.83■□□□□ 0.93
TOP1P11387 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.83■□□□□ 0.93
TOP1P11387 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TOP1P11387 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TOP1P11387 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TOP1P11387 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.83■□□□□ 0.92
TOP1P11387 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.83■□□□□ 0.92
TOP1P11387 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
TOP1P11387 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
TOP1P11387 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TOP1P11387 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TOP1P11387 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TOP1P11387 AC100803.2-201ENST00000562459 1963 ntBASIC20.83■□□□□ 0.92
TOP1P11387 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.92
TOP1P11387 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TOP1P11387 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TOP1P11387 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TOP1P11387 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.82■□□□□ 0.92
TOP1P11387 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TOP1P11387 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TOP1P11387 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TOP1P11387 AC010460.3-201ENST00000511359 1579 ntBASIC20.82■□□□□ 0.92
TOP1P11387 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TOP1P11387 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TOP1P11387 FAM220CP-201ENST00000395253 831 ntBASIC20.82■□□□□ 0.92
TOP1P11387 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TOP1P11387 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.82■□□□□ 0.92
TOP1P11387 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TOP1P11387 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.82■□□□□ 0.92
TOP1P11387 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TOP1P11387 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TOP1P11387 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TOP1P11387 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TOP1P11387 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TOP1P11387 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TOP1P11387 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TOP1P11387 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TOP1P11387 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.81■□□□□ 0.92
TOP1P11387 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOP1P11387 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOP1P11387 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOP1P11387 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TOP1P11387 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TOP1P11387 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
TOP1P11387 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TOP1P11387 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TOP1P11387 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TOP1P11387 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOP1P11387 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOP1P11387 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TOP1P11387 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOP1P11387 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.81■□□□□ 0.92
TOP1P11387 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.81■□□□□ 0.92
TOP1P11387 AF238378.1-201ENST00000526806 358 ntBASIC20.81■□□□□ 0.92
TOP1P11387 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.81■□□□□ 0.92
TOP1P11387 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
TOP1P11387 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.81■□□□□ 0.92
TOP1P11387 AL031008.1-201ENST00000619963 541 ntBASIC20.81■□□□□ 0.92
TOP1P11387 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOP1P11387 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOP1P11387 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOP1P11387 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOP1P11387 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOP1P11387 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOP1P11387 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.81■□□□□ 0.92
TOP1P11387 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TOP1P11387 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.81■□□□□ 0.92
TOP1P11387 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TOP1P11387 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TOP1P11387 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.81■□□□□ 0.92
TOP1P11387 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TOP1P11387 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP1P11387 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TOP1P11387 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP1P11387 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TOP1P11387 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.8■□□□□ 0.92
TOP1P11387 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.8■□□□□ 0.92
TOP1P11387 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.8■□□□□ 0.92
TOP1P11387 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP1P11387 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP1P11387 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.8■□□□□ 0.92
TOP1P11387 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TOP1P11387 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TOP1P11387 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP1P11387 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TOP1P11387 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.8■□□□□ 0.92
TOP1P11387 AC026396.1-201ENST00000419388 421 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms