Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.06□□□□□ -0.16
IFNA1P01562 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
IFNA1P01562 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.06□□□□□ -0.16
IFNA1P01562 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.06□□□□□ -0.16
IFNA1P01562 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.06□□□□□ -0.16
IFNA1P01562 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.06□□□□□ -0.16
IFNA1P01562 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.06□□□□□ -0.16
IFNA1P01562 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
IFNA1P01562 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC14.06□□□□□ -0.16
IFNA1P01562 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.06□□□□□ -0.16
IFNA1P01562 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.06□□□□□ -0.16
IFNA1P01562 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
IFNA1P01562 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IFNA1P01562 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IFNA1P01562 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IFNA1P01562 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
IFNA1P01562 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IFNA1P01562 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IFNA1P01562 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
IFNA1P01562 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IFNA1P01562 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
IFNA1P01562 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
IFNA1P01562 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.05□□□□□ -0.16
IFNA1P01562 AL109659.2-201ENST00000606809 1674 ntBASIC14.05□□□□□ -0.16
IFNA1P01562 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
IFNA1P01562 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IFNA1P01562 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IFNA1P01562 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IFNA1P01562 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IFNA1P01562 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IFNA1P01562 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.05□□□□□ -0.16
IFNA1P01562 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IFNA1P01562 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
IFNA1P01562 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.05□□□□□ -0.16
IFNA1P01562 C1QL1P1-201ENST00000568105 661 ntBASIC14.05□□□□□ -0.16
IFNA1P01562 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
IFNA1P01562 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.05□□□□□ -0.16
IFNA1P01562 PARP1-210ENST00000629232 477 ntTSL 5 BASIC14.05□□□□□ -0.16
IFNA1P01562 AL161772.1-201ENST00000610494 4412 ntBASIC14.05□□□□□ -0.16
IFNA1P01562 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.05□□□□□ -0.16
IFNA1P01562 LINC00304-203ENST00000565008 1864 ntBASIC14.05□□□□□ -0.16
IFNA1P01562 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IFNA1P01562 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
IFNA1P01562 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
IFNA1P01562 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
IFNA1P01562 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
IFNA1P01562 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
IFNA1P01562 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
IFNA1P01562 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IFNA1P01562 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IFNA1P01562 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
IFNA1P01562 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
IFNA1P01562 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.04□□□□□ -0.16
IFNA1P01562 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 AC138969.2-201ENST00000532739 9932 ntBASIC14.04□□□□□ -0.16
IFNA1P01562 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.04□□□□□ -0.16
IFNA1P01562 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.04□□□□□ -0.16
IFNA1P01562 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
IFNA1P01562 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.04□□□□□ -0.16
IFNA1P01562 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.04□□□□□ -0.16
IFNA1P01562 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
IFNA1P01562 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.04□□□□□ -0.16
IFNA1P01562 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.04□□□□□ -0.16
IFNA1P01562 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.04□□□□□ -0.16
IFNA1P01562 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IFNA1P01562 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms